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Article dans une revue

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Roger Frutos, Hubert Denise, Christian Vivarès, Jean-Marc Neuhaus, Sandro Vitale, et al.. Pharmaceutical proteins in plants. A strategic genetic engineering approach for the production of tuberculosis antigens.. Annals of the New York Academy of Sciences, Wiley, 2008, 1149, pp.275-80. 〈10.1196/annals.1428.089〉. 〈hal-00529956〉
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Jean-Louis Bonnet, Frédérique Bonnemoy, M. Dusser, Jacques Bohatier. Toxicity assessment of the herbicides sulcotrione and mesotrione toward two reference environmental microorganisms: Tetrahymena pyriformis and Vibrio fischeri.. Archives of Environmental Contamination and Toxicology, Springer Verlag, 2008, 55 (4), pp.576-83. 〈10.1007/s00244-008-9145-2〉. 〈hal-00528107〉
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Ivan Wawrzyniak, Michaël Roussel, Marie Diogon, Arnaud Couloux, Catherine Texier, et al.. Complete circular DNA in the mitochondria-like organelles of Blastocystis hominis.. International Journal for Parasitology, Elsevier, 2008, 38 (12), pp.1377-1382. 〈10.1016/j.ijpara.2008.06.001〉. 〈hal-00527813〉
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Philippe Roingeard, Christophe Hourioux, Emmanuelle Blanchard, Gérard Prensier. Hepatitis C virus budding at lipid droplet-associated ER membrane visualized by 3D electron microscopy.. Histochemie / Histochemistry Histochimie, 2008, 130 (3), pp.561-6. 〈10.1007/s00418-008-0447-2〉. 〈inserm-00285203〉
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A. Arraj, Jacques Bohatier, Claire Aumeran, Jean-Luc Bailly, H. Laveran, et al.. An epidemiological study of enteric viruses in sewage with molecular characterization by RT-PCR and sequence analysis.. Journal of Water and Health, IWA Publishing, 2008, 6 (3), pp.351-8. 〈hal-00528321〉
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Isabelle Mary, Laurence Garczarek, Glen A Tarran, Christian Kolowrat, Matthew J Terry, et al.. Diel rhythmicity in amino acid uptake by Prochlorococcus.. Environmental Microbiology, Wiley-Blackwell, 2008, 10 (8), pp.2124-31. 〈10.1111/j.1462-2920.2008.01633.x〉. 〈hal-00528824〉
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Apostolos-Manuel Koussoroplis, Charles Lemarchand, Alexandre Bec, Christian Desvilettes, Christian Amblard, et al.. From aquatic to terrestrial food webs: decrease of the docosahexaenoic acid/linoleic acid ratio.. Lipids, Springer Verlag, 2008, 43 (5), pp.461-6. 〈10.1007/s11745-008-3166-5〉. 〈hal-00525871〉
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Cécile Lepère, Isabelle Domaizon, Didier Debroas. Unexpected importance of potential parasites in the composition of the freshwater small-eukaryote community. Applied and Environmental Microbiology, American Society for Microbiology, 2008, 74 (10), pp.2940-9. 〈10.1128/AEM.01156-07〉. 〈hal-00528208〉
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Angia Sriram Pradeep Ram, Télesphore Sime-Ngando. Functional responses of prokaryotes and viruses to grazer effects and nutrient additions in freshwater microcosms. ISME Journal, Nature Publishing Group, 2008, 2 (5), pp.498-509. 〈10.1038/ismej.2008.15〉. 〈hal-00526575〉
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P. Lepage, J. Colombet, P. Marteau, Télesphore Sime-Ngando, J. Doré, et al.. Dysbiosis in inflammatory bowel disease: a role for bacteriophages?. Gut, BMJ Publishing Group, 2008, 57 (3), pp.424-5. 〈10.1136/gut.2007.134668〉. 〈hal-00526557〉
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Abdel Belkorchia, Corinne Biderre, Cécile Militon, Valérie Polonais, Patrick Wincker, et al.. In vitro propagation of the microsporidian pathogen Brachiola algerae and studies of its chromosome and ribosomal DNA organization in the context of the complete genome sequencing project. Parasitology International, Elsevier, 2008, 57 (1), pp.62-71. 〈10.1016/j.parint.2007.09.002〉. 〈hal-00529592〉
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Stéphane Pesce, Céline Fajon, Corinne Bardot, Frédérique Bonnemoy, Christophe Portelli, et al.. Longitudinal changes in microbial planktonic communities of a French river in relation to pesticide and nutrient inputs.. Aquatic Toxicology, Elsevier, 2008, 86 (3), pp.352-60. 〈10.1016/j.aquatox.2007.11.016〉. 〈hal-00528323〉
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Muriel Mazet, Marie Diogon, John F Alderete, Christian Vivarès, Frédéric Delbac. First molecular characterisation of hydrogenosomes in the protozoan parasite Histomonas meleagridis.. International Journal for Parasitology, Elsevier, 2008, 38 (2), pp.177-90. 〈10.1016/j.ijpara.2007.06.006〉. 〈hal-00527816〉
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Isabelle Mary, Glen A Tarran, Phillip E Warwick, Matthew J Terry, David J Scanlan, et al.. Light enhanced amino acid uptake by dominant bacterioplankton groups in surface waters of the Atlantic Ocean.. FEMS Microbiology Ecology, Wiley-Blackwell, 2008, 63 (1), pp.36-45. 〈10.1111/j.1574-6941.2007.00414.x〉. 〈hal-00528826〉
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Pierre Larmande, Céline Gay, Mathias Lorieux, Christophe Périn, Matthieu Bouniol, et al.. Oryza Tag Line, a phenotypic mutant database for the Genoplante rice insertion line library. Nucleic Acids Research, Oxford University Press, 2008, 36 (Database issue), pp.D1022-7. 〈10.1093/nar/gkm762〉. 〈hal-00464031〉
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J. C. Vardamides, Hicham El Alaoui, D. L. Massoma, A. G. B. Azebaze, B. Ndemangou, et al.. Anticoccidial constituents from the stem bark of Turraeanthus africanus. Chemistry of Natural Compounds, Springer Verlag, 2008, 44 (6), pp.696-700. 〈hal-00529781〉
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Franck H. Gleason, Maiko Kagami, Emilie Lefèvre, Télesphore Sime-Ngando. The ecology of chytrids in aquatic ecosystems: roles in food web dynamics. Fungal Biology Reviews, Elsevier, 2008, 22 (1), pp.17-25. 〈10.1016/j.fbr.2008.02.001〉. 〈hal-00527383〉
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Pierre-Yves Pascal, Dupuy Christine, Clarisse Mallet, Pierre Richard, Nathalie Niquil. Bacterivory by benthic organisms in sediment: quantification using 15N-enriched bacteria. Journal of Experimental Marine Biology and Ecology, Elsevier, 2008, 355 (1), pp.18-26. 〈hal-00530026〉
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M. Zubkov, G. A. Tarran, Isabelle Mary, B.M. Fuchs. Differential microbial uptake of dissolved amino acids and amino sugars in surface waters of the Atlantic Ocean. Journal of Plankton Research, Oxford University Press (OUP), 2008, 30, pp.211-220. 〈hal-00528831〉
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Yvan Bettarel, Robert Arfi, Thierry Bouvier, Marc Bouvy, Briand Enora, et al.. Virioplankton distribution and activity in a tropical eutrophicated bay. Estuarine, Coastal and Shelf Science, Elsevier, 2008, 80 (3), pp.425-429. 〈hal-00526253〉
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Télesphore Sime-Ngando, J. Colombet, Sébastien Personnic, Isabelle Domaizon, Ursula Dorigo, et al.. Short-term variations in abundances and potential activities of viruses, bacteria and nanoprotists in Lake Bourget. Ecological Research, 2008, 23 (5), pp.851-861. 〈10.1007/s11284-007-0448-y〉. 〈hal-00525993〉
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Claire Valiente Moro, Jean Thioulouse, Claude Chauve, Philippe Normand, Lionel Zenner. Bacterial taxa associated with the hematophagous mite Dermanyssus gallinae detected by 16S rRNA PCR amplification and TTGE fingerprinting. Research in Microbiology, Elsevier, 2008, pp.1-8. 〈10.1016/j.resmic.2008.10.006〉. 〈halsde-00354551〉
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Stéphane Pesce, Corinne Bardot, Anne-Catherine Lehours, Isabelle Batisson, Jacques Bohatier, et al.. Effects of diuron in microcosms on natural riverine bacterial community composition : new insight into phylogenetic approaches using PCR-TTGE analysis. Aquatic Sciences - Research Across Boundaries, Springer Verlag, 2008, 70 (4), pp.410-418. 〈hal-00528265〉
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Felicity Vear, F. Serre, Isabelle Jouan-Dufournel, Pierre-François Bert, S. Roche, et al.. Inheritance of quantitative resistance to downy mildew (Plasmopara halstedii) in sunflower (Helianthus annuus L.). Euphytica, 2008, 164 (2), pp.561-570. 〈hal-00528103〉
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Julien Pisson, Jean-Pierre Morel, Nicole Morel-Desrosiers, Christine Taviot-Gueho, Patrice Malfreyt. Molecular modeling of the structure and dynamics of the interlayer species of ZnAlCl layered double hydroxide.. Journal of Physical Chemistry B, American Chemical Society, 2008, 112, pp.7856-7864. 〈hal-00315489〉
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Mohieddine Missaoui, David Hill, Pierre Peyret. A comparison of algorithms for a complete backtranslation of oligopeptides. Int J Comput Biol Drug Des, 2008, 1 (1), pp.26-38. 〈hal-00529597〉
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Pierre-Yves Pascal, Dupuy Christine, Clarisse Mallet, Pierre Richard, Nathalie Niquil. Bacterivory by benthic organisms in sediment: quantification using 15N enriched bacteria. Journal of Experimental Marine Biology and Ecology, Elsevier, 2008, pp.18-26. 〈10.1016/j.jembe.2007.11.012〉. 〈hal-00293538〉
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Emilie Lefèvre, Balbine Roussel, Christian Amblard, Télesphore Sime-Ngando. The molecular diversity of freshwater picoeukaryotes reveals high occurrence of putative parasitoids in the plankton. PLoS ONE, Public Library of Science, 2008, 3 (6), pp.e2324. 〈10.1371/journal.pone.0002324〉. 〈hal-00526223〉
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Anne Desnues, Maïmouna Cissoko, Marc Bouvy, Télesphore Sime-Ngando, Emma Verling, et al.. Effects of freshwater and seawater mixing on virio- and bacterioplankton in a tropical estuary. Freshwater Biology, Wiley, 2008, 53 (6), pp.1154-1162. 〈hal-00526248〉
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Communication dans un congrès

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O. Crouzet, Pascale Besse-Hoggan, Frédérique Bonnemoy, Jacques Bohatier, Clarisse Mallet. Impact of the herbicide mesotrione on the microbial processes of the nitrogen cycle in an agricultural soil (Limagne, France). Congrès Interdisciplinaire "Interactions entre les processus physico-chimiques et microbiologiques dans l'environnement", Oct 2008, AUBIERE, France. 〈hal-00331929〉
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C. Valiente Moro, D. Latour, Jacques Bohatier, Bruno Combourieu. Impact of two herbicides on cyanobacteria metabolism : a combined physiological and metabolomic study. 1st Congress of the Federation for Environment Research, "Interactions between physico-chemical and microbiological processes in the environment", Oct 2008, Clermont-Ferrand, France. 〈hal-00352590〉
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O. Crouzet, Pascale Besse-Hoggan, Bruno Combourieu, Frédérique Bonnemoy, C. Bardot, et al.. A microcosm approach to evaluate the mesotrione effects on microbial communities of an agricultural soil (Limagne, France). 1st Congress of the Federation for Environment Research, "Interactions between physico-chemical and microbiological processes in the environment", Oct 2008, Clermont-Ferrand, France. 〈hal-00352387〉
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Isabelle Batisson, O. Crouzet, Pascale Besse-Hoggan, Martine Sancelme, J. F. Mangot, et al.. Isolation and characterization of mesotrione-degrading bacteria from a french agricultural soil. 1st Congress of the Federation for Environment Research, "Interactions between physico-chemical and microbiological processes in the environment", Oct 2008, Clermont-Ferrand, France. 〈hal-00352386〉
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Stéphanie Durand, T. Charbouillot, O. Crouzet, Isabelle Batisson, Martine Sancelme, et al.. Biodegradation of the herbicide mesotrione in soil from batch to microcosm experiments. Congrès Interdisciplinaire "Interactions entre les processus physico-chimiques et microbiologiques dans l'environnement", Oct 2008, AUBIERE, France. 〈hal-00331949〉
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Adeline A. J. Wall, Michel Magny, Jean-François Carrias, Daniel Gilbert. Distribution des amibes à thèque dans 3 lacs français.. 7ème CILO - Congrès International de Limnologie-Océanographie, Oct 2008, Rouen, France. 〈hal-00432655〉
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Isabelle Batisson, Stéphane Pesce, Pascale Besse-Hoggan, Martine Sancelme, Jacques Bohatier. Diversity analysis, isolation and characterization of diuron-degrading bacteria from lotic surface water. SETAC Europe, 18th Annual Meeting, May 2008, Varsovie, Poland. 〈hal-00345705〉
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Chapitre d'ouvrage

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Cécile Militon, Corinne Biderre, Pierre Peyret. New tools for isolation and identification of micro-organisms.. Ashok Pandey, Christian Larroche, Carlos Ricardo Soccol and Claude-Gilles Dussap. Advances in Fermentation Technology, Asiatech Publishers, Inc., New Delhi, 672 p., ISBN 8187680180, 2008. 〈hal-00704709〉
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Poster

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Olivier Crouzet, Isabelle Batisson, Pascale Besse-Hoggan, Jacques Bohatier, Clarisse Mallet. Réponse des communautés microbiennes du sol aux herbicides: exemple de la mésotrione dans une étude dose-effet en microcosme. XXXIXème congrès du Groupe Français des Pesticides, May 2008, Toulouse, France. 2008. 〈hal-01628845〉
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Thèse

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Raghida Damaj. Squelette membranaire chez Paramecium Tetraurelia : analyse structurale et fonctionnelle de la famille multigénique des épiplasmines. Biologie cellulaire. Université Blaise Pascal - Clermont-Ferrand II, 2008. Français. 〈NNT : 2008CLF21869〉. 〈tel-00731002〉
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Jonathan Colombet. Importance de la variabilité verticale dans un lac méromictique profond: diversité et activité lysogène des communautés virales. Biodiversité et Ecologie. Université Blaise Pascal - Clermont-Ferrand II; Université d'Auvergne - Clermont-Ferrand I, 2008. Français. 〈tel-00730192〉
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