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Frédéric Chamieh, Anne-Margaux Collignon, Benjamin R. Coyac, Julie Lesieur, Sandy Ribes, et al.. Accelerated craniofacial bone regeneration through dense collagen gel scaffolds seeded with dental pulp stem cells. Scientific Reports, Nature Publishing Group, 2016, 6 (1), 〈10.1038/srep38814〉. 〈hal-01624254〉
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A. Brown, A. Vallenari, T. Prusti, H. De Bruijne, F. Mignard, et al.. Gaia Data Release 1. Summary of the astrometric, photometric, and survey properties. Astronomy and Astrophysics - A&A, EDP Sciences, 2016, 595, pp.id.A2. 〈10.1051/0004-6361/201629512〉. 〈hal-01407396〉
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https://arxiv.org/pdf/1609.04172 BibTex
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Denise Antona, Manoëlle Kossorotoff, Isabelle Schuffenecker, Audrey Mirand, Marianne Leruez-Ville, et al.. Severe paediatric conditions linked with EV-A71 and EV-D68, France, May to October 2016. Eurosurveillance, European Centre for Disease Prevention and Control, 2016, 21 (46), 〈10.2807/1560-7917.ES.2016.21.46.30402〉. 〈hal-01883166〉
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Nathanael Lampe, David Biron, Jeremy M. C. Brown, Sébastien Incerti, Pierre Marin, et al.. Simulating the Impact of the Natural Radiation Background on Bacterial Systems: Implications for Very Low Radiation Biological Experiments. PLoS ONE, Public Library of Science, 2016, 11 (11), 〈10.1371/journal.pone.0166364〉. 〈hal-01610267〉
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Jeremy Lafolie, Audrey Mirand, Maud Salmona, Alexandre Lautrette, Christine Archimbaud, et al.. Severe Pneumonia Associated with Adenovirus Type 55 Infection, France, 2014. Emerging Infectious Diseases, Centers for Disease Control and Prevention, 2016, 22 (11), pp.2012-2014. 〈10.3201/eid2211.160728〉. 〈hal-01883168〉
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Benjamin Legrand, Amélie Lamarque, Marion Sabart, Delphine Latour. Characterization of akinetes from cyanobacterial strains and lake sediment: A study of their resistance and toxic potential. Harmful Algae, Elsevier, 2016, 59, pp.42 - 50. 〈10.1016/j.hal.2016.09.003〉. 〈hal-01919205〉
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Anne-Catherine Lehours, Anne-Hélène Le Jeune, Jean-Pierre Aguer, Régis Céréghino, Bruno Corbara, et al.. Unexpectedly high bacteriochlorophyll a concentrations in neotropical tank bromeliads. Environmental Microbiology Reports, Wiley, 2016, 8 (5), pp.689 - 698. 〈10.1111/1758-2229.12426〉. 〈hal-01623623〉
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C. Jacomet, G. Illes, F. Kwiatkowski, M. Vidal, N. Mrozek, et al.. Prevalence of aortic valve dystrophy and insufficiency in a cohort of 255 HIV-positive patients followed-up in a cardiology department between 2012 and 2014. International Journal of Cardiology, Elsevier, 2016, 220, pp.82 - 86. 〈10.1016/j.ijcard.2016.06.237〉. 〈hal-01675311〉
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S. Samoudi, D. Latour, J. Robin, M. Sabart, Benjamin Misson, et al.. Horizontal distribution of the cell abundance and toxicity of Microcystis in a hypereutrophic Moroccan reservoir. Contemporary Problems of Ecology, 2016, 9 (5), pp.554 - 562. 〈10.1134/S1995425516050139〉. 〈hal-01826036〉
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Benjamin Legrand, Jérôme Lesobre, Jonathan Colombet, Delphine Latour, Marion Sabart. Molecular tools to detect anatoxin-a genes in aquatic ecosystems: Toward a new nested PCR-based method. Harmful Algae, Elsevier, 2016, 58, pp.16 - 22. 〈10.1016/j.hal.2016.07.002〉. 〈hal-01919206〉
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Benjamin Legrand, Jerome Lesobre, Jonathan Colombet, Delphine Latour, Marion Sabart. Molecular tools to detect anatoxin-a genes in aquatic ecosystems: Toward a new nested PCR-based method. Harmful Algae, Elsevier, 2016, 58, 〈10.1016/j.hal.2016.07.002〉. 〈hal-01360406〉
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Mathilde Jeanbille, Jérôme Gury, Robert Duran, Jacek Tronczynski, Jean-François Ghiglione, et al.. Chronic Polyaromatic Hydrocarbon (PAH) Contamination Is a Marginal Driver for Community Diversity and Prokaryotic Predicted Functioning in Coastal Sediments. Frontiers in microbiology, Frontiers Research Foundation, 2016, 7, pp.1303. 〈10.3389/fmicb.2016.01303〉. 〈hal-01599382v2〉
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S. Pradeep Ram, S. Chaibi-Slouma, J. Keshri, J. Colombet, T. Sime-Ngando. Functional Responses of Bacterioplankton Diversity and Metabolism to Experimental Bottom-Up and Top-Down Forcings. Microbial Ecology, Springer Verlag, 2016, 72 (2), pp.347 - 358. 〈10.1007/s00248-016-0782-0〉. 〈hal-01623632〉
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Damien Balestrino, Mercédès Quintana, Nicolas Charbonnel, Christiane Forestier, Claire Lartigue, et al.. Compatibility of Injectable Anticoagulant Agents in Ethanol; In Vitro Antibiofilm Activity and Impact on Polyurethane Catheters of Enoxaparin 400 U/mL in 40% v/v Ethanol. PLoS ONE, Public Library of Science, 2016, 11 (7), 〈10.1371/journal.pone.0159475〉. 〈hal-01394030〉
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O. Lesens, O Baud, C. Henquell, A Lhermet, Nurse, J. Beytout. Varicella outbreak in Sudanese refugees from Calais. Journal of Travel Medicine, Wiley-Blackwell, 2016, 23 (5), 〈10.1093/jtm/taw042〉. 〈hal-01883179〉
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Jérôme Ory, Geneviève Bricheux, Anne Togola, Jean Louis Bonnet, Florence Donnadieu-Bernard, et al.. Ciprofloxacin residue and antibiotic-resistant biofilm bacteria in hospital effluent. Environmental Pollution (1970), Elsevier Science, 2016, 214, 〈10.1016/j.envpol.2016.04.033〉. 〈hal-01342460〉
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A. Lhermet, Z. Lacombe, O. Baud, C. Henquell, J. Beytout, et al.. INF-04 - Épidémie de varicelle chez des migrants Soudanais en provenance de Calais. Médecine et Maladies Infectieuses, Elsevier Masson, 2016, 46 (4), 〈10.1016/S0399-077X(16)30590-X〉. 〈hal-01883174〉
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G. Laurichesse, S. Casanova, V. Corbin, A. Mirand, C. Henquell, et al.. HEP-06 - Nouveaux antiviraux oraux contre le virus de l’hépatite C chez des patients co-infectés VIH-VHC : remarquables résultats des combinaisons orales sans interféron, 2014-2015. Médecine et Maladies Infectieuses, Elsevier Masson, 2016, 46 (4), 〈10.1016/S0399-077X(16)30383-3〉. 〈hal-01883177〉
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Léo Chassiot, Emmanuel Chapron, Christian Di Giovanni, Patrick Albéric, Patrick Lajeunesse, et al.. Extreme events in the sedimentary record of maar Lake Pavin: Implications for natural hazards assessment in the French Massif Central. Quaternary Science Reviews, Elsevier, 2016, 141, pp.9-25. 〈10.1016/j.quascirev.2016.03.020〉. 〈insu-01303646〉
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Rafik Boudra, Rosyne Lagrafeuille, Corinne Lours-Calet, Cyrille De Joussineau, Gaëlle Loubeau-Legros, et al.. mTOR transcriptionally and post-transcriptionally regulates Npm1 gene expression to contribute to enhanced proliferation in cells with Pten inactivation. Cell Cycle, Taylor & Francis, 2016, 15 (10), pp.1352 - 1362. 〈10.1080/15384101.2016.1166319〉. 〈hal-01922092〉
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Louis Carles, Pascale Besse-Hoggan, Muriel Joly, Armelle Vigouroux, Solange Moréra, et al.. Functional and structural characterization of two Bacillus megaterium nitroreductases biotransforming the herbicide mesotrione.. Biochemical Journal, Portland Press, 2016, pp.1443-53. 〈10.1042/BJ20151366〉. 〈hal-01457189〉
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Christophe Audebert, Gaël Even, Amandine Cian, Dima El Safadi, Gabriela Certad, et al.. Colonization with the enteric protozoa Blastocystis is associated with increased diversity of human gut bacterial microbiota. Scientific Reports, Nature Publishing Group, 2016, 6, 〈10.1038/srep25255〉. 〈hal-01363189〉
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Sylvie Miquel, Rosyne Lagrafeuille, Bertrand Souweine, Christiane Forestier. Anti-biofilm Activity as a Health Issue. Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.592. 〈10.3389/fmicb.2016.00592〉. 〈hal-01394090〉
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M Krupovic, Be Dutilh, Em Adriaenssens, J Wittmann, Fk Vogensen, et al.. Taxonomy of prokaryotic viruses: update from the ICTV bacterial and archaeal viruses subcommittee.. Archives of Virology, Springer Verlag, 2016, 161 (4), pp.1095-1099. 〈10.1007/s00705-015-2728-0〉. 〈hal-01557489〉
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Marwan Osman, Dima El Safadi, Amandine Cian, Sadia Benamrouz, Céline Nourrisson, et al.. Correction: Prevalence and Risk Factors for Intestinal Protozoan Infections with Cryptosporidium, Giardia, Blastocystis and Dientamoeba among Schoolchildren in Tripoli, Lebanon. PLoS Neglected Tropical Diseases, Public Library of Science, 2016, 10 (4), 〈10.1371/journal.pntd.0004643〉. 〈hal-01363187〉
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Thomas Jephcott, Télesphore Sime-Ngando, Frank H. Gleason, Deborah J. Macarthur. Host–parasite interactions in food webs: Diversity, stability, and coevolution. Food Webs, C.A. Layman, 2016, 6, pp.1 - 8. 〈10.1016/j.fooweb.2015.12.001〉. 〈hal-01623614〉
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Marwan Osman, Dima El Safadi, Amandine Cian, Sadia Benamrouz, Céline Nourrisson, et al.. Prevalence and Risk Factors for Intestinal Protozoan Infections with Cryptosporidium, Giardia, Blastocystis and Dientamoeba among Schoolchildren in Tripoli, Lebanon. PLoS Neglected Tropical Diseases, Public Library of Science, 2016, 10 (3), 〈10.1371/journal.pntd.0004496〉. 〈hal-01363185〉
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M. Jobard, J. Pessiot, R. Nouaille, G. Fonty, T. Sime-Ngando. Microbial diversity in support of anaerobic biomass valorization. Critical Reviews in Biotechnology, Taylor & Francis, 2016, 37 (1), pp.1 - 10. 〈10.3109/07388551.2015.1100584〉. 〈hal-01624065〉
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Angia Sriram Pradeep Ram, Jonathan Colombet, Fanny Perrière, Antoine Thouvenot, Télesphore Sime-Ngando. Viral Regulation of Prokaryotic Carbon Metabolism in a Hypereutrophic Freshwater Reservoir Ecosystem (Villerest, France). Frontiers in Microbiology, Frontiers Media, 2016, 7, 〈10.3389/fmicb.2016.00081〉. 〈hal-01623641〉
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C. Lontsi Djimeli, A. Tamsa Arfao, V Rossi, N Nsulem, V. Raspal, et al.. Impact of two disinfectants on detachment of Enterococcus faecalis from polythene in aquatic microcosm. Research in Biotechnology, 2016, 7 (1), 〈10.19071/rib.2016.v7.2981〉. 〈hal-01626931〉
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F Laude, F Valot, F Desoubeaux, F Argy, F Nourrisson, et al.. Is real-time PCR-based diagnosis similar in performance to routine parasitological examination for the identification of Giardia intestinalis , Cryptosporidium parvum / Cryptosporidium hominis and Entamoeba histolytica from stool samples? Evaluation of a new commercial multiplex PCR assay and literature review. Clinical Microbiology and Infection, Elsevier for the European Society of Clinical Microbiology and Infectious Diseases, 2016, 22 (2), pp.190.e1 - 190.e8. 〈10.1016/j.cmi.2015.10.019〉. 〈hal-01698271〉
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Ines Othman, Romain Volle, Aida Elargoubi, Mohamed Guediche, Mohamed Chakroun, et al.. Enterovirus meningitis in Tunisia (Monastir, Mahdia, 2011–2013): identification of virus variants cocirculating in France. Diagnostic Microbiology and Infectious Disease, Elsevier, 2016, 84 (2), pp.116 - 122. 〈10.1016/j.diagmicrobio.2015.10.019〉. 〈hal-01883192〉
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Imen Louati, Noémie Pascault, Didier Debroas, Cécile Bernard, Jean-François Humbert, et al.. Correction: Structural Diversity of Bacterial Communities Associated with Bloom-Forming Freshwater Cyanobacteria Differs According to the Cyanobacterial Genus. PLoS ONE, Public Library of Science, 2016, 11 (1), pp.e0146866. 〈10.1371/journal.pone.0146866〉. 〈hal-01360257〉
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Charles Vorilhon, Christophe Massard, Vincent Raspal, Yves Sibaud, Christiane Forestier, et al.. Feasibility of a Chronic Foreign Body Infection Model Studying the Influence of TiO2 Nanotube Layers on Bacterial Contamination. Journal of Biomaterials and Nanobiotechnology, Scientific Research, 2016, 07 (01), pp.45 - 54. 〈10.4236/jbnb.2016.71006〉. 〈hal-01829437〉
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https://hal.archives-ouvertes.fr/hal-01829437/file/JBNB_2016CV.pdf BibTex
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Isabelle Schuffenecker, Audrey Mirand, Laurence Josset, Cécile Henquell, Denise Hecquet, et al.. Epidemiological and clinical characteristics of patients infected with enterovirus D68, France, July to December 2014. Eurosurveillance, European Centre for Disease Prevention and Control, 2016, 21 (19), 〈10.2807/1560-7917.es.2016.21.19.30226〉. 〈hal-01883183〉
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https://hal.archives-ouvertes.fr/hal-01883183/file/eurosurv-21-30226-2.pdf BibTex
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Pierre Simonet, Karen Gaget, Nicolas Parisot, Gabrielle Duport, Marjolaine Rey, et al.. Disruption of phenylalanine hydroxylase reduces adult lifespan and fecundity, and impairs embryonic development in parthenogenetic pea aphids. Scientific Reports, Nature Publishing Group, 2016, 6, 〈10.1038/srep34321〉. 〈hal-01388523〉
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https://hal.inria.fr/hal-01388523/file/srep34321.pdf BibTex
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C. Nourrisson, I. Wawrzyniak, A. Cian, Valerie Livrelli, F. Viscogliosi, et al.. On Blastocystis secreted cysteine proteases: a legumain-activated cathepsin B increases paracellular permeability of intestinal Caco-2 cell monolayers. Parasitology, Cambridge University Press (CUP), 2016, 143 (13), pp.1713-1722. 〈10.1017/S0031182016001396〉. 〈hal-01606978〉
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Éric Capo, Didier Debroas, Fabien Arnaud, Typhaine Guillemot, Vincent Bichet, et al.. Long-term dynamics in microbial eukaryotes communities: a palaeolimnological view based on sedimentary DNA. Molecular Ecology, Wiley, 2016, 25 (23), pp.5925-5943 〈10.1111/mec.13893〉. 〈hal-01568922〉
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Simon Roux, Francois Enault, Viviane Ravet, Jonathan Colombet, Yvan Bettarel, et al.. Analysis of metagenomic data reveals common features of halophilic viral communities across continents. Environmental Microbiology, Wiley-Blackwell, 2016, 18 (3), pp.889 - 903. 〈10.1111/1462-2920.13084〉. 〈pasteur-01375524〉
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Corinne Biderre-Petit, Eric Dugat-Bony, Mickaël Mege, Nicolas Parisot, Lorenz Adrian, et al.. Distribution of dehalococcoidia in the anaerobic deep water of a remote meromictic crater lake and detection of dehalococcoidia-derived reductive dehalogenase homologous genes. PLoS ONE, Public Library of Science, 2016, 11 (1), 〈10.1371/journal.pone.0145558〉. 〈hal-01599389v2〉
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Céline Leroy, Jean-François Carrias, Régis Céréghino, Bruno Corbara. The contribution of microorganisms and metazoans to mineral nutrition in bromeliads. Journal of Plant Ecology, 2016, 9 (3), pp.241-255. 〈10.1093/jpe/rtv052〉. 〈hal-01532637〉
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T. Prusti, H. De Bruijne, A. Brown, A. Vallenari, C. Babusiaux, et al.. The Gaia mission. Astronomy and Astrophysics - A&A, EDP Sciences, 2016, 595, pp.id.A1. 〈10.1051/0004-6361/201629272〉. 〈hal-01409603〉
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https://arxiv.org/pdf/1609.04153 BibTex
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Claire Marquès, Christine Franceschi, Valérie Collin, Frédéric Laurent, Sonia Chatellier, et al.. Genome Sequence of a Clinical Staphylococcus aureus Strain from a Prosthetic Joint Infection. Genome Announcements, American Society for Microbiology, 2016, 4 (2), pp.e00198-16. 〈10.1128/genomeA.00198-16〉. 〈hal-01394081〉
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David Lopez, Maroua Ben Amira, Daniel Brown, Beatriz Muries, Nicole Brunel-Michac, et al.. The Hevea brasiliensis XIP aquaporin subfamily: genomic, structural and functional characterizations with relevance to intensive latex harvesting. Plant Molecular Biology, Springer Verlag (Germany), 2016, 91 (4-5), pp.375 - 396. 〈hal-01378944〉
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Thomas G. Jephcott, Catharina Alves-De-Souza, Frank H. Gleason, Floris F. Ogtrop, Télesphore Sime-Ngando, et al.. Ecological impacts of parasitic chytrids, syndiniales and perkinsids on populations of marine photosynthetic dinoflagellates. Fungal Ecology, Elsevier, 2016, 19, pp.47-58. 〈10.1016/j.funeco.2015.03.007〉. 〈hal-01253977〉
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O. B. Mobili, C. Lontsi Djimeli, L. M. Moungang, O Allaadhin, A Tamsa Arfao, et al.. Microbial treatment of water containing the bacteria Enterococcus faecalis and Escherichia coli in microcosm using Artemesia annua plant extract: Hierarchical order of some abiotic factors affecting cell’s cultivability. European Journal of Biotechnology and Bioscience, 2016, 4 (9), pp.16-26. 〈http://www.biosciencejournals.com/archives/?year=2016&vol=4&issue=9〉. 〈hal-01392643〉
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Antoine Arfao, Chrétien Djimeli, Olive Ewoti, Geneviève Bricheux, Moïse Nola, et al.. Detachment of adhered enteropathogenic Escherichia coli cells from polythene fragments immersed in aquatic microcosm using Eucalyptus microcorys extract (Myrtaceae). Current Research in Microbiology and Biotechnology, Aizeon publishers, 2016, 4 (3), pp.847-857. 〈http://crmb.aizeonpublishers.net/content/2016/3/no3.html〉. 〈hal-01392650〉
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A Tamsa Arfao, C Lontsi Djimeli, O Noah Ewoto, Geneviève Bricheux, M Nola, et al.. Detachment of adhered enteropathogenic Escherichia coli cells from polythene fragments immersed in aquatic microcosm using Eucalyptus microcorys extract (Myrtaceae). Current Research in Microbiology and Biotechnology, 2016, 4 (3), pp.847-857. 〈hal-01394098〉
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O Mobili, C Lontsi Djimeli, L Moungang, O Allaahdin, A Tamasa Arfao, et al.. Microbial treatment of water containing the bacteria Enterococcus faecalis and Escherichia coli in microcosm using Artemesia annua plant extract: Hierarchical order of some abiotic factors affecting cell’s cultivability. European Journal of Biotechnology and Bioscience Onlinebiosciencejournals.com Volume, 2016, 4 (9), pp.16-26. 〈hal-01394093〉
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Jean-Louis Reyss, Arnaud Mangeret, Christelle Courbet, Sylvain Bassot, Gilles Alcalde, et al.. Estimation of sedimentation rates based on the excess of radium 228 in granitic reservoir sediments. Journal of Environmental Radioactivity, Elsevier, 2016, 162-163, pp.8 - 13. 〈10.1016/j.jenvrad.2016.04.032〉. 〈hal-01587405〉
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Florence Donnadieu, Pascale Besse-Hoggan, Christiane Forestier, Joan Artigas. Influence of streambed substratum composition on stream microbial communities exposed to the fungicide tebuconazole. Freshwater Biology, Wiley, 2016, 61, pp.2026-2036. 〈10.1111/fwb.12679〉. 〈hal-01479184〉
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Benoit Keraval, Anne Catherine Lehours, Jonathan Colombet, Christian Amblard, Gaël Alvarez, et al.. Soil carbon dioxide emissions controlled by an extracellular oxidative metabolism identifiable by its isotope signature. Biogeosciences, European Geosciences Union, 2016, 13 (22), pp.6353 - 6362. 〈10.5194/bg-13-6353-2016〉. 〈hal-01595310〉
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T Bertran, P Brachet, M Vareille-Delarbre, J Falenta, A Dosgilbert, et al.. Slight Pro-Inflammatory Immunomodulation Properties of Dendritic Cells by Gardnerella vaginalis: The “Invisible Man” of Bacterial Vaginosis?. Journal of Immunology Research, Hindawi Publishing Corporation, 2016, 2016. 〈hal-01394040〉
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Thomas Bertran, Patrick Brachet, Marjolaine Vareille, Julie Falenta, Annie Dosgilbert, et al.. Slight Pro-Inflammatory Immunomodulation Properties of Dendritic Cells byGardnerella vaginalis: The “Invisible Man” of Bacterial Vaginosis?. Journal of Immunology Research, Hindawi Publishing Corporation, 2016, pp.1-13. 〈10.1155/2016/9747480〉. 〈hal-01595704〉
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Kada Klouche, Samir Jaber, Jean-Louis Trouillet, Fabrice Bruneel, Laurent Argaud, et al.. Empirical Micafungin Treatment and Survival Without Invasive Fungal Infection in Adults With ICU-Acquired Sepsis, Candida Colonization, and Multiple Organ Failure The EMPIRICUS Randomized Clinical Trial. Journal of the American Medical Association, American Medical Association (AMA), 2016, 316 (15), pp.1555--1564. 〈10.1001/jama.2016.14655〉. 〈hal-01405822〉
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S. Pesce, O. Zoghlami, C. Margoum, J. Artigas, A. Chaumot, et al.. Combined effects of drought and the fungicide tebuconazole on aquatic leaf litter decomposition. Aquatic Toxicology, Elsevier, 2016, 173, pp.120-131. 〈10.1016/j.aquatox.2016.01.012〉. 〈hal-01804836〉
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Anne Mercier, Joanne Bertaux, Jérôme Lesobre, Kevin Gravouil, Julien Verdon, et al.. Characterization of biofilm formation in natural water subjected to low-frequency electromagnetic fields.. Biofouling, Taylor & Francis, 2016, 32 (3), pp.287-99. 〈hal-01427807〉
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Patrice Baa-Puyoulet, Nicolas Parisot, Gérard Febvay, Jaime Huerta-Cepas, Augusto F Vellozo, et al.. ArthropodaCyc: a CycADS powered collection of BioCyc databases to analyse and compare metabolism of arthropods. Database - The journal of Biological Databases and Curation, Oxford University Press, 2016, 〈10.1093/database/baw081〉. 〈hal-01352558〉
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Cyril Guilhen, Nicolas Charbonnel, Nicolas Parisot, Nathalie Gueguen, Agnès Iltis, et al.. Transcriptional profiling of Klebsiella pneumoniae defines signatures for planktonic, sessile and biofilm-dispersed cells. BMC Genomics, BioMed Central, 2016, 17 (1), 〈10.1186/s12864-016-2557-x〉. 〈hal-01394069〉
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P. Duval, C. Chatelard-Chauvin, C. Gayard, E. Rifa, P. Bouchard, et al.. Microbial dynamics in industrial blue veined cheeses in different packaging. International Dairy Journal, Elsevier, 2016, 56, pp.198 - 207. 〈10.1016/j.idairyj.2016.01.024〉. 〈hal-01393545〉
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Cécile Lepère, Isabelle Domaizon, Mylène Hugoni, Agnès Vellet, Didier Debroas. Diversity and Dynamics of Active Small Microbial Eukaryotes in the Anoxic Zone of a Freshwater Meromictic Lake (Pavin, France). Frontiers in Microbiology, Frontiers Media, 2016, 7 (130), 〈10.3389/fmicb.2016.00130〉. 〈hal-01599386v2〉
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Lin Zhu, Anouk Zancarini, Imen Louati, Silvia De Cesare, Charlotte Duval, et al.. Bacterial communities associated with four cyanobacterial genera display structural and functional differences: evidence from an experimental approach. Frontiers in Microbiology, Frontiers Media, 2016, 7, pp.1-11. 〈10.3389/fmicb.2016.01662〉. 〈hal-01602443〉
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Flore Ballaud, Alexis Dufresne, Andre-Jean Francez, Jonathan Colombet, Télesphore Sime-Ngando, et al.. Dynamics of Viral Abundance and Diversity in a Sphagnum-Dominated Peatland: Temporal Fluctuations Prevail Over Habitat. Frontiers in Microbiology, Frontiers Media, 2016, 6, pp.1494. 〈10.3389/fmicb.2015.01494〉. 〈hal-01263117〉
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Damien Costa, Anne Mercier, Kevin Gravouil, Jérôme Lesobre, Julien Verdon, et al.. Occurrence and diversity of both bacterial and fungal communities in dental unit waterlines subjected to disinfectants.. Foodborne Pathogens and Disease, Mary Ann Liebert, 2016, 74 (7). 〈hal-01427811〉
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Olivier Crouzet, Franck Poly, Frédérique Bonnemoy, David Bru, Isabelle Batisson, et al.. Functional and structural responses of soil N-cycling microbial communities to the herbicide mesotrione: a dose-effect microcosm approach. Environmental Science and Pollution Research, Springer Verlag, 2016, 23 (5), pp.4207 - 4217. 〈10.1007/s11356-015-4797-8〉. 〈hal-01394067〉
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Alexandra Chapuis, Cécile Chabrot, Audrey Mirand, Philippe Poirier, Céline Nourrisson. Encephalitis caused by an unusual human herpes virus type 6 and Toxoplasma gondii co-infection in a cord blood transplant recipient. International Journal of Infectious Diseases, Elsevier, 2016, 46, pp.79-81. 〈10.1016/j.ijid.2016.04.002〉. 〈hal-01883191〉
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Communication dans un congrès

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Olivier Crouzet, Christelle Marrauld, Pierre-Alain Maron, Frédéric Rimet, Christian Mougin, et al.. The significance of soil microalgae and cyanobacteria to assess pesticide stresses, in agricultural soils. SETAC Europe 26th Annual Meeting, May 2016, Nantes, France. 2016. 〈hal-01531658〉
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Olivier Crouzet, Laurent Consentino, Christelle Marrauld, Clarisse Mallet, Pierre-Alain Maron, et al.. Les microalgues et cyanobactéries des sols : quels apports pour l’écotoxicologie terrestre. 3ème journée Ecotoxicomic, Mar 2016, Valence, France. 2016. 〈hal-01608368〉
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Chapitre d'ouvrage

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Juan J Quereda, Martin Sachse, Damien Balestrino, Théodore Grenier, Jennifer Fredlund, et al.. Assessing Vacuolar Escape of Listeria Monocytogenes.. Collin M. Bacterial Pathogenesis, 1535, Humana Press, New York, NY, pp.173-195, 2016, Methods in Molecular Biology, 978-1-4939-6671-4. 〈10.1007/978-1-4939-6673-8_11〉. 〈pasteur-01574133〉
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Jean-François Carrias, Christian Amblard, Telesphore Sime-Ngando. The significance of transparent exopolymeric particles (TEP) for microorganisms in Lake Pavin.. Lac Pavin - History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake, 2016. 〈hal-01623860〉
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Anne Catherine Lehours, Guillaume Borrel, Nicole Morel-Desrosiers, Corinne Bardot, Vincent Grossi, et al.. Anaerobic microbial communities and processes involved in the methane cycle in freshwater lakes - a focus on lake Pavin.. Lake Pavin: History, biogeochemistry and sedimentology of a deep meromictic crater lake, 2016. 〈hal-01623844〉
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Telesphore Sime-Ngando, Yvan Bettarel, Jonathan Colombet, Stéphanie Palesse, Angia Sriram Pradeep Ram, et al.. Lake Pavin: A pioneer site for ecological studies of freshwater viruses. Lake Pavin: History, biogeochemistry and sedimentology of a deep meromictic crater lake, 2016. 〈hal-01623848〉
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Telesphore Sime-Ngando, Mélanie Gerphagnon, Jonathan Colombet, Marlène Jobard, Emilie Lefèvre, et al.. Molecular diversity studies in Lake Pavin reveal the ecological importance of parasitic true fungi in the plankton. Lac Pavin - History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake, 2016. 〈hal-01623857〉
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Jean-François Carrias, Christian Amblard, Gilles Bourdier, Telesphore Sime-Ngando. The importance of phagotrophic protists in Lake Pavin. Lac Pavin - History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake., 2016. 〈hal-01624028〉
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Gisèle Bronner, Didier Debroas, Francois Enault, Mylène Hugoni, Isabelle Jouan-Dufournel, et al.. Study of microorganisms and virus in aquatic ecosystems by metagenetic and metagenomic approaches.. Lake Pavin: History, biogeochemistry and sedimentology of a deep meromictic crater lake, 2016. 〈hal-01623825〉
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Léo Chassiot, E Chapron, Yannick Miras, Markus J. Schwab, Patrick Albéric, et al.. Lake Pavin Paleolimnology and Event Stratigraphy. Lake Pavin, history, geology, biogeochemistry and sedimentology of a deep meromictic maar lake, Springer, pp.381 - 406, 2016, 〈10.1007/978-3-319-39961-4_23〉. 〈hal-01447131〉
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Eric Dugat-Bony, Pierre Peyret, Corinne Biderre-Petit. New insights into the microbial contribution to the chlorine cycle in aquatic ecosystems. Lake Pavin, Springer International Publishing, 2016, 978-3-319-39960-7. 〈10.1007/978-3-319-39961-4_17〉. 〈hal-01533913〉
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Dov Jean-François Corenblit, Bruno Corbara, Johannes Steiger. Biogeomorphic ecosystems within stressful and disturbed environments: a focus on termites and pioneer plants. Johnson E.; Martin Y. A Biogeoscience Approach to Ecosystems, Cambridge University Press, pp.456-474, 2016. 〈hal-01576286〉
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Ouvrage (y compris édition critique et traduction)

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Telesphore Sime-Ngando, Pierre Boivin, Emmanuel Chapron, Didier Jezequel, Michel Meybeck. Lac Pavin – History, geology, biogeochemistry, and sedimentology of a deep meromictic maar lake. . 2016. 〈hal-01623853〉
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Thèse

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Louis Carles. Devenir de mélanges de pesticides : étude des voies de biodégradation et développement d'une méthode préventive de bioremédiation. Sciences agricoles. Université Blaise Pascal - Clermont-Ferrand II, 2016. Français. 〈NNT : 2016CLF22759〉. 〈tel-01544582〉
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Benoît Keraval. Les métabolismes oxydatifs extracellulaires : une nouvelle vision des processus de minéralisation du carbone organique du sol. Biodiversité et Ecologie. Université Blaise Pascal - Clermont-Ferrand II, 2016. Français. 〈NNT : 2016CLF22740〉. 〈tel-01882691v2〉
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Rosyne Lagrafeuille. Activités anti-biofilm de Lactobacillus vis-à-vis de Klebsiella Pneumoniae. Médecine humaine et pathologie. Université d'Auvergne - Clermont-Ferrand I, 2016. Français. 〈NNT : 2016CLF1PP03〉. 〈tel-01661354v2〉
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Damien Mouly. Ecologie de la santé humaine : contribution à l'étude et à la surveillance des épidémies de gastro-entérite aigüe d'origine hydrique. Sciences agricoles. Université Blaise Pascal - Clermont-Ferrand II, 2016. Français. 〈NNT : 2016CLF22706〉. 〈tel-01479931〉
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