Publications HAL de alex,baumel;baumel;carole,borchiellini;borchiellini;anne,chenuil;chenuil;vincent,dubut;dubut;jean-pierre,feral;feral;serge,gudin;gudin;yoan,labrousse;labrousse;manuel,le bris;emese,meglec;meglec;lucie,miché;miché;pascal,mirleau;mirleau;yvan,perez;emmanuelle,renard;renard;caroline,rocher;rocher;marjorie,selva du labo/EPI IMBE;UMS_COM;DIMAR;IMEP

2024

Journal articles

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Kassandra de Pao Mendonca, Perrine Chaurand, Andrea Campos, Mauro Rovezzi, Ludovic Delage, et al.. Hyper-accumulation of vanadium in animals: Two sponges compete with urochordates. Science of the Total Environment, 2024, 914, pp.169410. ⟨10.1016/j.scitotenv.2023.169410⟩. ⟨hal-04390579⟩
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Sophie Martin, Virgile Calvert, Anne Chenuil. Physiological differences among cryptic species of the Mediterranean crustose coralline alga Lithophyllum stictiforme (Corallinales, Rhodophyta). European Journal of Phycology, In press, ⟨10.1080/09670262.2023.2281484⟩. ⟨hal-04329191v2⟩
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Pascal Mirleau, Fatina Jouni, Juliette Chappat, Christophe Mazzia, Juan Carlos Sanchez-Hernandez, et al.. Effect of an organophosphorus insecticide, soil texture and earthworm species on the turnover of soil, gut and cast microbiota during the earthworm's gut transit. Soil Biology and Biochemistry, 2024, 190, pp.109293. ⟨10.1016/j.soilbio.2023.109293⟩. ⟨hal-04474490⟩
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https://hal.science/hal-04474490/file/Mirleau-JouniEtAl_EarthwormMicrobiotaEParathion_HAL_2024.pdf BibTex
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Léo Rocher, Emile Melloul, Olivier Blight, Armin Bischoff. Effect of spontaneous vegetation on beneficial arthropods in Mediterranean vineyards. Agriculture, Ecosystems & Environment, 2024, 359, pp.108740. ⟨10.1016/j.agee.2023.108740⟩. ⟨hal-04409915⟩
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Conference papers

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Alain Norro, Jean-Pierre Feral Feral. The ISO-8804 series: What kind of Scientific Diving is concerned here ?. 8th European Conference on Scientific Diving, HCMR Hellenic Centre for Marine Research, Apr 2024, Heraklion (Crete Island), Greece. ⟨10.5281/zenodo.11074810⟩. ⟨hal-04561535⟩
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Other publications

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Charlotte Sonigo, Geoffroy Robin, Florence Boitrelle, Eloïse Fraison, Nathalie Sermondade, et al.. Prise en charge de première intention du couple infertile : mise à jour des RPC 2010 du CNGOF. 2024, ⟨10.1016/j.gofs.2024.01.014⟩. ⟨hal-04493709⟩
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2023

Journal articles

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Alex Baumel, Cristina Roquet, Sébastien Lavergne, Jan Smyčka, Luc Garraud, et al.. Evolutionary distinctiveness with incomplete isolation of the narrow endemic alpine plant Saxifraga delphinensis Ravaud. Alpine Botany, 2023, 133, pp.85-99. ⟨10.1007/s00035-023-00297-2⟩. ⟨hal-04142470⟩
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Abigail E Cahill, Emese Meglécz, Anne Chenuil. Scientific history, biogeography, and biological traits predict presence of cryptic or overlooked species. Biological Reviews, In press, ⟨10.1111/brv.13034⟩. ⟨hal-04327610⟩
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Manuel Cartereau, Alex Baumel, Agathe Leriche, Frédéric Médail, Arnoldo Santos Guerra, et al.. Germination niche of the endangered dragon tree Dracaena draco (L.) L. subsp. draco of the Macaronesian Islands. Flora, 2023, 308, pp.152405. ⟨10.1016/j.flora.2023.152405⟩. ⟨hal-04346285⟩
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Manuel Cartereau, Agathe Leriche, Frédéric Médail, Alex Baumel. Tree biodiversity of warm drylands is likely to decline in a drier world. Global Change Biology, 2023, pp.1-16. ⟨10.1111/gcb.16722⟩. ⟨hal-04088353⟩
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Kassandra de Pao Mendonca, Bernard Angeletti, Aurélie Dufour, Carole Borchiellini, Lars-Eric Heimbürger-Boavida, et al.. The sponge Oscarella lobularis (Porifera, Homoscleromorpha) as a suitable biomonitor of metallic contamination in Mediterranean coastal ecosystems. Marine Pollution Bulletin, 2023, 188, pp.114665. ⟨10.1016/j.marpolbul.2023.114665⟩. ⟨hal-03979892v2⟩
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Jean-Pierre Féral, Alain Norro. Specific initial training standards are needed to dive for science in Europe, Occupational vs. Citizen Science Diving. Frontiers in Marine Science, 2023, 10, pp.1134494. ⟨10.3389/fmars.2023.1134494⟩. ⟨hal-04447664⟩
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Jean-Pierre Féral, Thomas Saucède. Les iles Saint-Paul et Amsterdam, une aire marine protégée française « pilote » au sud de l’océan Indien ?. ESpèces - Revue d’Histoire naturelle , 2023, 47, pp.21-34. ⟨10.5281/zenodo.7682515⟩. ⟨hal-03883056⟩
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Aitor González, Vincent Dubut, Emmanuel Corse, Reda Mekdad, Thomas Dechatre, et al.. VTAM: A robust pipeline for validating metabarcoding data using controls. Computational and Structural Biotechnology Journal, 2023, 21, pp.1151 - 1156. ⟨10.1016/j.csbj.2023.01.034⟩. ⟨hal-03978642⟩
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Francesco Mugnai, Federica Costantini, Anne Chenuil, Michèle Leduc, José Miguel Gutiérrez Ortega, et al.. Be positive: customized reference databases and new, local barcodes balance false taxonomic assignments in metabarcoding studies. PeerJ, 2023, 11, pp.e14616. ⟨10.7717/peerj.14616⟩. ⟨hal-03931396⟩
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Emmanuelle Renard, Quentin Schenkelaars, Caroline Rocher, Amélie Vernale, Kassandra de Pao Mendonca, et al.. L’éponge marine Oscarella lobularis un modèle pour comprendre l’origine et l’évolution des épithéliums. Revue Française d'Histotechnologie, 2023, 35 (1), pp.23-43. ⟨10.25830/afh.rfh.2023.35.1.23⟩. ⟨hal-04316212⟩
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Sébastien Santini, Quentin Schenkelaars, Cyril Jourda, Marc Duchesne, Hassiba Belahbib, et al.. The compact genome of the sponge Oopsacas minuta (Hexactinellida) is lacking key metazoan core genes. BMC Biology, 2023, 21 (1), pp.139. ⟨10.1186/s12915-023-01619-w⟩. ⟨hal-03757223⟩
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Anna Thomasdotter, Peter Shum, Francesco Mugnai, Marina Vingiani, Vincent Dubut, et al.. Spineless and overlooked: DNA metabarcoding of autonomous reef monitoring structures reveals intra‐ and interspecific genetic diversity in Mediterranean invertebrates. Molecular Ecology Resources, 2023, 23 (7), pp.1689-1705. ⟨10.1111/1755-0998.13836⟩. ⟨hal-04304529⟩
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Lorène Tosini, Manuel Cartereau, Yoann Le Bagousse-Pinguet, Isabelle Laffont-Schwob, Pascale Prudent, et al.. Plant biodiversity offsets negative effects of metals and metalloids soil multi-contamination on ecosystem multifunctionality. Science of the Total Environment, 2023, pp.165567. ⟨10.1016/j.scitotenv.2023.165567⟩. ⟨hal-04165585⟩
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Claudia Voigt, Anne Alexandre, Ilja M Reiter, Jean-Philippe Orts, Christine Vallet-Coulomb, et al.. Examination of the parameters controlling the triple oxygen isotope composition of grass leaf water and phytoliths at a Mediterranean site: a model–data approach. Biogeosciences, 2023, 20 (11), pp.2161-2187. ⟨10.5194/bg-20-2161-2023⟩. ⟨hal-04304247⟩
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Aicha Mehirou Zouggar, Pascal Mirleau, Anne Chenuil, Francoise Denis, Aurore Caruso, et al.. Extreme and Heterogeneous Conditions of the Desert Wetland Chott Ech Chergui (Algeria) Allow Isolating Halophilic, Alkalophilic and Thermophilic Bacteria. Wetlands, 2023, 43 (108), ⟨10.1007/s13157-023-01757-5⟩. ⟨hal-04320473⟩
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Conference papers

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Alex Baumel, Frédéric Médail, Gonzalo Nieto Feliner, Stefano La Malfa, Mario Diguardo, et al.. Late Pleistocene expansions from a single climatic refugium and close wild–domesticated relationships in the carob tree. XVII OPTIMA (Organization for the Phyto-Taxonomic Investigation of the Mediterranenan Area) Meeting Symposium, Gianniantonio Domina, Sep 2023, Erice, Italy. ⟨hal-04433734⟩
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Jean-Pierre Féral, Alain Norro. European standards for initial training in occupational scientific diving, a necessity, and a guarantee for the mobility of scientists and effective research in the coastal environment. 7th European Conference on Scientific Diving, Comité National pour la Plongée Scientifique, May 2023, Roscoff, France. ⟨10.13140/RG.2.2.25683.35365⟩. ⟨hal-04180475⟩
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Hervé Macarie, Yoan Labrousse, Aurélie Amic, Nicolas Cimetiere, Alain Soler, et al.. Fate of the insecticide chlordecone under methanogenic conditions. XIV Latin American Workshop and Symposium on Anaerobic Digestion (DAAL XIV),, Instituto de Ingeniería - Universidad Nacional Autónoma de México (II-UNAM), campus Juriquilla, Oct 2023, Querétaro, Mexico. ⟨ird-04433493⟩
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L Miche, Laurence Affre. Gestion conservatoire des populations de l'astragale de Marseille (Astragalus tragacantha) dans le Parc National des Calanques. Dix ans de recherches de l'Observatoire Hommes-Milieux Littoral méditerranéen sur le Littoral marseillais, OHM Littoral méditerranéen; ESPACE UMR 7300, Jun 2023, Marseille (13), France. ⟨hal-04142011⟩
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Léo Rocher, Léa Saby, Romane Blaya, Sarah Kubien, Emile Melloul, et al.. La restauration des écosystèmes : de l'amélioration des services écosystémiques à la restauration écologique. CNRIUT 2023 Saint Pierre - La Réunion, IUT de Saint Pierre, Jun 2023, Saint Pierre (La Réunion), La Réunion. ⟨hal-04326684⟩
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Noëlle Sarkis, Cédric Amadéi, Hugo Amella, Bernard Angeletti, Cécile Chemin, et al.. Biodiversité épiphyte des feuilles de posidonie et bioconcentration de contaminants : suivi pluriannuel des herbiers de Fos, Marseille et Toulon. Dix ans de recherches de l'Observatoire Hommes-Milieux Littoral méditerranéen sur le Littoral marseillais, OHM Littoral méditerranéen; ESPACE UMR 7300, Jun 2023, Marseille (13), France. ⟨hal-04141983⟩
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Book sections

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Guy Duhamel, Jean-Pierre Féral. Les invertébrés pélagiques (zooplancton, necton) de la zone des îles Saint-Paul et Amsterdam, premières données. Duhamel G. Les îles Saint-Paul et Amsterdam (Océan Indien sud): environnement marin et pêcheries, 84, Muséum national d'histoire naturelle, pp.98-102, A paraître, Patrimoines naturels. ⟨hal-03575170⟩
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Jean-Pierre Féral. Les ceintures de Phéophycées des îles Saint-Paul et Amsterdam. Duhamel G. Les îles Saint-Paul et Amsterdam (Océan Indien sud): environnement marin et pêcheries, 84, Muséum national d'histoire naturelle, pp.44-50, A paraître, Patrimoines naturels. ⟨hal-03575185⟩
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Jean-Pierre Féral. Le macrobenthos des îles Saint-Paul et Amsterdam. Duhamel G. Les îles Saint-Paul et Amsterdam (Océan Indien sud): environnement marin et pêcheries, 84, Publications Scientifiques du Muséum, pp.51-85, A paraître, Collections Patrimoines naturels. ⟨hal-03575176⟩
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Other publications

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Jean-Pierre Féral, Thomas Saucède. L’algue géante Macrocystis pyrifera. Supplément à l’article ‘Les iles Saint-Paul et Amsterdam, une aire marine protégée « pilote »?. 2023, 3 pp. ⟨10.5281/zenodo.7691753⟩. ⟨hal-04011513⟩
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Poster communications

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Régis Hocdé, Gérard Thouzeau, Sophie Bourquin, Laurent Borel, Mathieu Coulange, et al.. Scientific diving in France: an overview of the current practices in science. 7th European Conference on Scientific Diving, May 2023, Roscoff, France. 1 p. multigr., 2023, ⟨10.23708/fdi:010087876⟩. ⟨hal-04094861⟩
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2022

Journal articles

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Marie Ampères Bedine Boat, Nadira Taïeb, Sofia Agriopoulou, L Miche, Davy Moussango, et al.. Identification of native soil-derived Trichoderma spp. isolates and analysis of their antagonist traits against Lasiodiplodia theobromae causing stem-end rot in papaya. Archives of Phytopathology and Plant Protection, 2022, 55 (15), pp.1766-1794. ⟨10.1080/03235408.2022.2116689⟩. ⟨hal-03777688⟩
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D. Aurelle, Séverine Thomas, Cécile H. Albert, Marc Bally, Alberte Bondeau, et al.. Biodiversity, climate change, and adaptation in the Mediterranean. Ecosphere, 2022, 13 (4), pp.2-23. ⟨10.1002/ecs2.3915⟩. ⟨hal-03670020⟩
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https://amu.hal.science/hal-03670020/file/Ecosphere%20-%202022%20-%20Aurelle%20-%20Biodiversity%20climate%20change%20and%20adaptation%20in%20the%20Mediterranean.pdf BibTex
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Alex Baumel, Gonzalo Nieto Feliner, Frédéric Médail, Stefano La Malfa, Mario Di Guardo, et al.. Genome‐wide footprints in the carob tree ( Ceratonia siliqua ) unveil a new domestication pattern of a fruit tree in the Mediterranean. Molecular Ecology, 2022, 31 (15), pp.4095-4111. ⟨10.1111/mec.16563⟩. ⟨hal-03711626⟩
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Manuel Cartereau, Agathe Leriche, Alex Baumel, Ian Ondo, Cyrille Chatelain, et al.. Global bioregionalization of warm drylands based on tree assemblages mined from occurrence big data. Frontiers of Biogeography, 2022, 14 (4), pp.e56435. ⟨10.21425/F5FBG56435⟩. ⟨hal-03990533⟩
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Aure Durbecq, Léo Rocher, Renaud Jaunatre, Alice Dupré La Tour, Elise Buisson, et al.. Mountain grassland restoration using hay and brush material transfer combined with temporary wheat cover. Ecological Engineering, 2022, pp.1-38. ⟨10.1016/j.ecoleng.2021.106447⟩. ⟨hal-03454196⟩
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Chiheb Fassatoui, Anne Chenuil, Mohamed Salah Romdhane. Integrating morphological and genetic data at different climate and geographic scales in an endangered freshwater mussel Unio durieui (Bivalvia: Unionidae) endemic to northern Tunisia. Journal of Molluscan Studies, 2022, 88 (1), pp.eyab040. ⟨10.1093/mollus/eyab040⟩. ⟨hal-03783749v2⟩
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Alma Heckenroth, Isabelle Laffont-Schwob, Teddy Baumberger, Pascale Prudent, Lidwine Le Mire Pecheux, et al.. Comment allier stabilisation des sols contaminés et préservation d’Astragalus tragacantha L. sur le littoral remarquable du Parc national des Calanques ?. Naturae, 2022, 3, pp.31-41. ⟨10.5852/naturae2022a3⟩. ⟨hal-03567306⟩
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Térence Legrand, Anne Chenuil, Enrico Ser-Giacomi, Sophie Arnaud-Haond, Nicolas Bierne, et al.. Spatial coalescent connectivity through multi-generation dispersal modelling predicts gene flow across marine phyla. Nature Communications, 2022, 13, ⟨10.1038/s41467-022-33499-z⟩. ⟨hal-03871531⟩
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Gauthier Monnet, Emmanuel Corse, Gaït Archambaud-Suard, Rémi Grenier, Rémi Chappaz, et al.. Growth variation in the endangered fish Zingel asper : Contribution of substrate quality, hydraulics, prey abundance, and water temperature. Aquatic Conservation: Marine and Freshwater Ecosystems, 2022, 32 (7), pp.1156-1170. ⟨10.1002/aqc.3818⟩. ⟨hal-03810369⟩
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Léo Rocher, Romane Blaya, Chloé Blaise, Armin Bischoff, Olivier Blight. Species and functional responses of ants to inter-row tillage and vegetation in organic Mediterranean vineyards. Basic and Applied Ecology, 2022, 65, pp.126-135. ⟨10.1016/j.baae.2022.11.009⟩. ⟨hal-03889624⟩
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Ludovic Sawelew, Christopher Nuccio, Colin Foord, Jean Lorquin, Yvan Perez. Symbiodiniaceae diversity and characterization of palytoxin in various zoantharians (Anthozoa, Hexacorallia). Organisms Diversity and Evolution, 2022, 22 (3), pp.555-576. ⟨10.1007/s13127-022-00550-2⟩. ⟨hal-04048140⟩
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Kurt Villsen, Emmanuel Corse, Gaït Archambaud‐suard, Kévin Héran, Emese Meglécz, et al.. Diet Metabarcoding Reveals Extensive Dietary Overlap between Two Benthic Stream Fishes (Zingel asper and Cottus gobio) and Provides Insights into Their Coexistence. Diversity, 2022, 14 (5), pp.1-19. ⟨10.3390/d14050412⟩. ⟨hal-03676193⟩
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Kurt Villsen, Emmanuel Corse, Emese Meglécz, Gaït Archambaud-Suard, Hélène Vignes, et al.. DNA metabarcoding suggests adaptive seasonal variation of individual trophic traits in a critically endangered fish. Molecular Ecology, 2022, 31 (22), pp.5889-5908. ⟨10.1111/mec.16698⟩. ⟨hal-03793011⟩
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https://hal.science/hal-03793011/file/Molecular%20Ecology%20-%202022%20-%20Villsen%20-%20DNA%20metabarcoding%20suggests%20adaptive%20seasonal%20variation%20of%20individual%20trophic%20traits%20in-2.pdf BibTex

Conference papers

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Alex Baumel. Phylogénomique ou génomique des populations ? Délimitation difficile d'un endémique au sein d'un syngaméon. Rencontres Inter-laboratoires Evolution (RILEM), RILEM, Sep 2022, Marseille, France. ⟨hal-04476223⟩
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Reports

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Jean-Pierre Féral, Alain Norro, Martin D.J. Sayer, Philipp Fischer. Common Practices for Recognition of European Competency levels for Scientific Diving at Work. ESDP's Consultation Document 1 (rev. 2), ESDP - European Scientific Diving Panel. 2022, pp.1-8. ⟨hal-03883096⟩
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Jean-Pierre Féral. Occupational Scientific Diving requirements facilitating safe mobility of scientific divers within Europe. ESDP's Consultation Document 6. version 1, ESDP - European Scientific Diving Panel. 2022, pp.1-34. ⟨hal-03883111⟩
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https://hal.science/hal-03883111/file/Occupational%20Scientific%20Diving%20requirements%20in%20European%20Countries_v.1_20220107_p.pdf BibTex

2021

Journal articles

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Margot Arnould-Pétré, Charlène Guillaumot, Bruno Danis, Jean-Pierre Féral, Thomas Saucède. Individual-based model of population dynamics in a sea urchin of the Kerguelen Plateau (Southern Ocean), Abatus cordatus, under changing environmental conditions. Ecological Modelling, 2021, 440, pp.109352. ⟨10.1016/j.ecolmodel.2020.109352⟩. ⟨hal-03018516v1⟩
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Teddy Baumberger, Alex Baumel, Pierre-Jean Dumas, Julien Ugo, Laureen Keller, et al.. Is a restricted niche the explanation for species vulnerability? Insights from a large field survey of Astragalus tragacantha L. (Fabaceae). Flora, 2021, 283, pp.151902. ⟨10.1016/j.flora.2021.151902⟩. ⟨hal-03453761⟩
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Gabriele Casazza, Carmelo Macrì, Davide Dagnino, Maria Guerrina, Marianick Juin, et al.. When ecological marginality is not geographically peripheral: exploring genetic predictions of the centre-periphery hypothesis in the endemic plant Lilium pomponium. PeerJ, 2021, 9, pp.e11039. ⟨10.7717/peerj.11039⟩. ⟨hal-03172039⟩
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Jean-Pierre Féral, Marc Verlaque, Sebastián Rosenfeld, Elie Poulin, Anne Chenuil, et al.. The marine vegetation of the Kerguelen Islands: history of scientific campaigns, inventory of the flora and first analysis of its biogeographical affinities. Cryptogamie Algologie, 2021, 42 (12), pp.173-216. ⟨10.5252/cryptogamie-algologie2021v42a12⟩. ⟨hal-03331534⟩
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Jean-Pierre Féral, Pierre Laboute. Premières plongées scientifiques en terre Adélie. ESpèces - Revue d’Histoire naturelle , 2021, 42, pp.38-47. ⟨hal-03455262⟩
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Christelle Fraïsse, Anne Haguenauer, Karin Gérard, Alexandra Anh-Thu Weber, Nicolas Bierne, et al.. Fine-grained habitat-associated genetic connectivity in an admixed population of mussels in the small isolated Kerguelen Islands. Peer Community Journal, 2021, 1, pp.e10. ⟨10.24072/pcjournal.18⟩. ⟨hal-03501373⟩
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Claudio A. González-Wevar, N.I. I Segovia, Sebastian Rosenfeld, Dominikus Noll, C.S. S Maturana, et al.. Contrasting biogeographical patterns in Margarella (Gastropoda: Calliostomatidae: Margarellinae) across the Antarctic Polar Front. Molecular Phylogenetics and Evolution, 2021, 156, pp.107039. ⟨10.1016/j.ympev.2020.107039⟩. ⟨hal-03074834⟩
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Frédéric Médail, Katia Diadema, Marine Pouget, Alex Baumel. Identification of plant micro-reserves using conservation units and population vulnerability: The case of an endangered endemic Snowflake (Acis nicaeensis) in the Mediterranean Basin hotspot. Journal for Nature Conservation, 2021, 61, pp.125980. ⟨10.1016/j.jnc.2021.125980⟩. ⟨hal-03159122⟩
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Francesco Mugnai, Emese Meglécz, Federica Costantini, Marco Abbiati, Giorgio Bavestrello, et al.. Are well-studied marine biodiversity hotspots still blackspots for animal barcoding?. Global Ecology and Conservation, 2021, 32, pp.e01909. ⟨10.1016/j.gecco.2021.e01909⟩. ⟨hal-03439752⟩
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Benjamin Pohl, Thomas Saucède, Julien Pergaud, Jean-Pierre Féral, Yves Richard, et al.. Recent climate variability around the Kerguelen Islands (Southern Ocean) seen through weather regimes. Journal of Applied Meteorology and Climatology, 2021, 60 (5), pp.711-731. ⟨10.1175/JAMC-D-20-0255.1⟩. ⟨hal-03235508⟩
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Sylvain Rigaud, Bruno Deflandre, Christian Grenz, Florian Cesbron, Lara Pozzato, et al.. Benthic oxygen dynamics and implication for the maintenance of chronic hypoxia and ecosystem degradation in the Berre lagoon (France). Estuarine, Coastal and Shelf Science, 2021, 258, pp.107437. ⟨10.1016/j.ecss.2021.107437⟩. ⟨hal-03249104⟩
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Farah Abdel Samad, Frederic Medail, Alex Baumel, Sonja Siljak Yakovlev, Anthony Roukoz, et al.. New insights on the conservation status of the Endangered coastal endemic plant Astragalus berytheus (Fabaceae) in Lebanon. Oryx, 2021, 55 (4), pp.519-521. ⟨10.1017/S0030605320000149⟩. ⟨hal-03022458⟩
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Amélie Vernale, Maria Mandela Prünster, Fabio Marchianò, Henry Debost, Nicolas Brouilly, et al.. Evolution of mechanisms controlling epithelial morphogenesis across animals: new insights from dissociation-reaggregation experiments in the sponge Oscarella lobularis. BMC Ecology and Evolution, 2021, 21 (1), pp.160. ⟨10.1186/s12862-021-01866-x⟩. ⟨hal-03438191⟩
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Conference papers

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Jean-Pierre Féral. Occupational Scientific Diving in the Marine Stations World. World Congress of Marine Stations [WCMS 2021], MARS, Nov 2021, Moscow, Russia. ⟨10.13140/RG.2.2.33710.02884⟩. ⟨hal-03455500⟩
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Alma Heckenroth, Lidwine Le Mire Pecheux, Isabelle Laffont-Schwob, Pascale Prudent, Teddy Baumberger, et al.. Towards the ecological restoration of the remarkable coastline of the Calanques National Park (Marseille, France): Combining stabilization of contaminated soils with Astragalus tragacantha L. conservation. IUCN congress 2020, 2021, Marseille, France. ⟨hal-03586186⟩
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Lorène Tosini, Hélène Folzer, Alma Heckenroth, Pascale Prudent, Mathieu Santonja, et al.. Restauration écologique des communautés végétales et microbiennes d’un site méditerranéen protégé contaminé en éléments traces métalliques et métalloïdes. Journée d'atelier du Réseau d'Echanges et de Valorisation en Ecologie de la Restauration, Jun 2021, Gap, France. ⟨hal-03586209⟩
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Lorène Tosini, Hélène Folzer, Alma Heckenroth, Pascale Prudent, Mathieu Santonja, et al.. Constraints and Perspectives of Combined Ecological Restoration and Phytoremediation on a Mediterranean Protected Area Contaminated with Heavy Metals. SER World Conference, 2021, virtual, United States. ⟨hal-03586236⟩
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Book sections

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Carole Borchiellini, Kassandra de Pao Mendonca, Amélie Vernale, Caroline Rocher, Alexander Ereskovsky, et al.. Porifera (Sponges): Recent Knowledge and New Perspectives. Encylopedia of Life Sciences, Wiley, 2021, ⟨10.1002/9780470015902.a0001582.pub2⟩. ⟨hal-03276432v2⟩
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Carole Borchiellini, Sandie Degnan, Emilie Le Goff, Caroline Rocher, Amélie Vernale, et al.. Staining and Tracking Methods for Studying Sponge Cell Dynamics. Developmental Biology of the Sea Urchin and Other Marine Invertebrates, 2219, Springer US, pp.81-97, 2021, Methods in Molecular Biology, ⟨10.1007/978-1-0716-0974-3_5⟩. ⟨hal-03025733⟩
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Jean-Pierre Féral, Guy Jacques. Le laboratoire "hors les murs" dans les Terres Australes, Bionomie benthique du plateau continental des iles Kerguelen. G. Jacques et Y. Desdevises. Du laboratoire Arago à l'Observatoire Océanologique de Banyuls, une épopée humaine et scientifique, Sorbonne Université Presses, pp.178-182, 2021, 979-10-231-0713-5. ⟨hal-03398780⟩
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Laura Fierro-Constaín, Caroline Rocher, Florent Marschal, Quentin Schenkelaars, Nina Séjourné, et al.. In Situ Hybridization Techniques in the Homoscleromorph Sponge Oscarella lobularis. Developmental Biology of the Sea Urchin and Other Marine Invertebrates, pp.181-194, 2021, ⟨10.1007/978-1-0716-0974-3_11⟩. ⟨hal-03025722⟩
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Yvan Perez, Carsten H.G. Müller, Steffen Harzsch. Phylum Chaetognatha. Schierwater B; DeSalle R. Invertebrate Zoology: A Tree of Life Approach, CRC Press, pp.231, 2021, 9780367685676. ⟨10.1201/9780429159053-15⟩. ⟨hal-03574749⟩
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Emmanuelle Renard, André Le Bivic, Carole Borchiellini. Origin and Evolution of Epithelial Cell Types (chapter 5 ). Origin and Evolution of Metazoan Cell Types, 1, CRC Press, pp.75-100, 2021, 9781315388229. ⟨10.1201/b21831-5⟩. ⟨hal-03205961⟩
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Emmanuelle Renard, Caroline Rocher, Alexander Ereskovsky, Carole Borchiellini. The Homoscleromorph Sponge, Oscarella lobularis. Handbook of Marine Model Organisms in Experimental Biology, 1, CRC Press, pp.79-100, 2021, ⟨10.1201/9781003217503-5⟩. ⟨hal-03414378⟩
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Poster communications

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Lorène Tosini, Hélène Folzer, Manuel Cartereau, Pascale Prudent, Nicolas Montes, et al.. Effects of metals and metalloids soil multi-contamination on Mediterranean biodiversity – ecosystem functioning relationships: does species identity matters?. Ecology Across Border - British Ecological Society ans SFE2 Mondial congress, 2021, London- virtual, United Kingdom. ⟨hal-03586278⟩
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Preprints, Working Papers, ...

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Aitor Gonzalez, Vincent Dubut, Emmanuel Corse, Reda Mekdad, Thomas Dechatre, et al.. VTAM: A robust pipeline for validating metabarcoding data using internal controls. 2021. ⟨hal-03144831⟩
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Caroline Rocher, Vernale Amélie, Fierro-Constaín Laura, Séjourné Nina, Chenesseau Sandrine, et al.. The buds of Oscarella lobularis (Porifera): a new convenient model for sponge cell and developmental biology. 2021. ⟨hal-03383073⟩
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2020

Journal articles

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Alex Baumel, Frederic Medail, Marianick Juin, Thibault Paquier, Marie Clares, et al.. Population genetic structure and management perspectives for Armeria belgenciencis, a narrow endemic plant from Provence (France). Plant Ecology and Evolution, 2020, 153 (2), pp.219-228. ⟨10.5091/plecevo.2020.1702⟩. ⟨hal-02900966⟩
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Alex Baumel. Du nouveau sur l’histoire du caroubier. La Garance Voyageuse, 2020, 129, pp.26-28. ⟨hal-02514022⟩
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Simon Blanchet, Jérôme Prunier, Ivan Paz-Vinas, Keoni Saint-Pé, Olivier REY, et al.. A river runs through it: The causes, consequences, and management of intraspecific diversity in river networks. Evolutionary Applications, 2020, 13 (6), pp.1195-1213. ⟨10.1111/eva.12941⟩. ⟨hal-02914974⟩
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Melih Ertan Çinar, Jean-Pierre Féral, Christos Arvanitidis, Romain David, Ergün Taşkin, et al.. Coralligenous assemblages along their geographical distribution: Testing of concepts and implications for management. Aquatic Conservation: Marine and Freshwater Ecosystems, 2020, 30, pp.1578 - 1594. ⟨10.1002/aqc.3365⟩. ⟨hal-02892573⟩
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Aggeliki Doxa, Vincent Devictor, Alex Baumel, Daniel Pavon, Frederic Medail, et al.. Beyond taxonomic diversity: Revealing spatial mismatches in phylogenetic and functional diversity facets in Mediterranean tree communities in southern France. Forest Ecology and Management, 2020, 474, pp.118318. ⟨10.1016/j.foreco.2020.118318⟩. ⟨hal-02883773⟩
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Hamza Khassali, Alex Baumel, Frédéric Mahé, Estelle Tournier, Pierre Tisseyre, et al.. The belowground bacterial and fungal communities differed in their significance as microbial indicator of Moroccan carob habitats. Ecological Indicators, 2020, 114, pp.1-9. ⟨10.1016/j.ecolind.2020.106341⟩. ⟨hal-02935066⟩
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J.K. Pearman, G. Chust, E. Aylagas, E. Villarino, J.R. Watson, et al.. Pan‐regional marine benthic cryptobiome biodiversity patterns revealed by metabarcoding Autonomous Reef Monitoring Structures. Molecular Ecology, 2020, 29, pp.4882-4897. ⟨10.1111/mec.15692⟩. ⟨hal-02973058⟩
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Jérôme Prunier, Camille Poesy, Vincent Dubut, Charlotte Veyssière, Géraldine Loot, et al.. Quantifying the individual impact of artificial barriers in freshwaters: A standardized and absolute genetic index of fragmentation. Evolutionary Applications, 2020, 13 (10), pp.2566-2581. ⟨10.1111/eva.13044⟩. ⟨hal-03033664⟩
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Sabine Stöhr, Alexandra Anh-Thu Weber, Emilie Boissin, Anne Chenuil. Resolving the Ophioderma longicauda (Echinodermata: Ophiuroidea) cryptic species complex: five sisters, three of them new. European Journal of Taxonomy, 2020, 600 (600), pp.1 - 37. ⟨10.5852/ejt.2020.600⟩. ⟨hal-02954067⟩
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Sabine Stöhr, Alexandra Anh-Thu Weber, Emilie Boissin, Anne Chenuil. Resolving the Ophioderma longicauda (Echinodermata: Ophiuroidea) cryptic species complex: five sisters, three of them new – Corrigendum. European Journal of Taxonomy, 2020, 607, pp.1-2. ⟨10.5852/ejt.2020.607⟩. ⟨hal-03453749⟩
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Lorène Lorène Tosini, H. Folzer, A. Heckenroth, P. Prudent, M. Santonja, et al.. Gain in biodiversity but not in phytostabilization after 3 years of ecological restoration of contaminated Mediterranean soils. Ecological Engineering, 2020, 157, pp.105998. ⟨10.1016/j.ecoleng.2020.105998⟩. ⟨hal-02919816⟩
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Christel Vidaller, Alex Baumel, Marianick Juin, Thierry Dutoit, Armin Bischoff. Comparison of neutral and adaptive differentiation in the Mediterranean grass Brachypodium retusum. Botanical Journal of the Linnean Society, 2020, 192 (3), pp.536-549. ⟨10.1093/botlinnean/boz089⟩. ⟨hal-02983389⟩
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Juan Viruel, Nicolas Le Galliot, Samuel Pironon, Gonzalo Nieto Feliner, Jean-Pierre Suc, et al.. A strong east–west Mediterranean divergence supports a new phylogeographic history of the carob tree ( Ceratonia siliqua , Leguminosae) and multiple domestications from native populations. Journal of Biogeography, 2020, 47 (2), pp.460-471. ⟨10.1111/jbi.13726⟩. ⟨hal-02305921⟩
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Poster communications

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Alex Baumel, Eleonora Potenza, Valentine Frelon, Juan Viruel, Gonzalo Nieto-Feliner, et al.. Incorporating phylogeography for modelling the distribution of the carob tree (Ceratonia siliqua, Leguminosae) in future climate change. Genetics to the rescue: Managing forests sustainably in a changing world. GENTREE final conference, Jan 2020, Avignon, France. . ⟨hal-02460403⟩
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2019

Journal articles

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Gaït Archambaud‐suard, Emmanuel Corse, Emese Meglécz, Rémi Chappaz, Vincent Dubut. Une étude inédite de métabarcoding pour étudier le régime alimentaire de l’apron. Sciences Eaux & Territoires, 2019, (Cahier spécial IV), pp.12-19. ⟨10.14758/set-revue.2019.cs4.03⟩. ⟨hal-02462400⟩
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Emmanuel Corse, Christelle Tougard, Gaït Archambaud‐suard, Jean‐françois Agnèse, Françoise Messu Mandeng, et al.. One‐locus‐several‐primers: A strategy to improve the taxonomic and haplotypic coverage in diet metabarcoding studies. Ecology and Evolution, 2019, 9 (8), pp.4603-4620. ⟨10.1002/ece3.5063⟩. ⟨hal-02109732⟩
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Romain David, Maria Uyarra, Susana Carvalho, Holger Anlauf, Angel Borja, et al.. Lessons from photo analyses of Autonomous Reef Monitoring Structures as tools to detect (bio-)geographical, spatial, and environmental effects. Marine Pollution Bulletin, 2019, 141, pp.420-429. ⟨10.1016/j.marpolbul.2019.02.066⟩. ⟨hal-02061256⟩
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Aurelien de Jode, Romain David, Anne Haguenauer, Abigail Cahill, Zinovia Erga, et al.. From seascape ecology to population genomics and back. Spatial and ecological differentiation among cryptic species of the red algae Lithophyllum stictiforme/L. cabiochiae, main bioconstructors of coralligenous habitats. Molecular Phylogenetics and Evolution, 2019, 137, pp.104-113. ⟨10.1016/j.ympev.2019.04.005⟩. ⟨hal-02125817⟩
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Marieke E Feis, M. Anouk Goedknegt, Isabelle Arzul, Anne Chenuil, Onno Den Boon, et al.. Global invasion genetics of two parasitic copepods infecting marine bivalves. Scientific Reports, 2019, 9, pp.12730. ⟨10.1038/s41598-019-48928-1⟩. ⟨hal-02290155⟩
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Rayhane Hamrouni, Josiane Molinet, Lucie Miche, Quentin Carboué, Nathalie Dupuy, et al.. Production of Coconut Aroma in Solid-State Cultivation: Screening and Identification of Trichoderma Strains for 6-Pentyl-Alpha-Pyrone and Conidia Production. Journal of Chemistry , 2019, 2019, pp.1-7. ⟨10.1155/2019/8562384⟩. ⟨hal-02279188⟩
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Laure Thierry de Ville d'Avray, Dominique Ami, A. Chenuil, Romain David, Jean-Pierre Feral. Application of the ecosystem service concept at a small-scale: The cases of coralligenous habitats in the North-western Mediterranean Sea. Marine Pollution Bulletin, 2019, 138, pp.160-170. ⟨10.1016/j.marpolbul.2018.10.057⟩. ⟨hal-01933094⟩
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Régine Verlaque, A. Delage, Alex Baumel, C. Piazza, Frédéric Médail. Hybridation en Corse et description d’un nouvel hybride: Anthyllis x gamisansii Delage et al. nothotaxon nov. (Fabaceae) (= A. barba-jovis L. x A. hermanniae L. subsp. corsica Brullo & Giusso). Journal de Botanique, 2019, 87, pp.97-108. ⟨hal-03533124⟩
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Régine Verlaque, Alain Delage, Alex Baumel, Carole Piazza, Frédéric Médail. Hybridation en Corse et description d’un nouvel hybride:Anthyllis xgamisansii Delage et al. nothotaxon nov. (Fabaceae) (= A. barba-jovis L. x A. hermanniae L. subsp. corsica Brullo & Giusso). Journal de Botanique, 2019, 87, pp.97-108. ⟨hal-02353627⟩
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Alexandra Anh-Thu Weber, Sabine Stöhr, Anne Chenuil. Species delimitation in the presence of strong incomplete lineage sorting and hybridization: Lessons from Ophioderma (Ophiuroidea: Echinodermata). Molecular Phylogenetics and Evolution, 2019, 131, pp.138-148. ⟨10.1016/j.ympev.2018.11.014⟩. ⟨hal-02075340⟩
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Diane Zarzoso-Lacoste, Elsa Bonnaud, Emmanuel Corse, Vincent Dubut, Olivier Lorvelec, et al.. Stuck amongst introduced species: Trophic ecology reveals complex relationships between the critically endangered Niau kingfisher and introduced predators, competitors and prey. NeoBiota, 2019, ⟨10.3897/neobiota.00.35086⟩. ⟨hal-02397164⟩
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Conference papers

ref_biblio
Valérie Andrieu-Ponel, M. Ghilardi, M. Renard. Les environnements végétaux et agricoles de la Crète de 3200 à 2600 cal BP révélés par l’étude du site de Phaistos (alt., 35 m, Grèce). MedPalyno2019: The Mediterranean Palynological Societies Symposium 2019, Jul 2019, Bordeaux, France. ⟨hal-03145124⟩
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Aurelien de Jode, Romain David, Jacky Dubar, J. Rostan, Dorian Guillemain, et al.. Community ecology of coralligenous assemblages using a metabarcoding approach. 3rd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions, Specially Protected Areas Regional Activity Centre (SPA/RAC), Jan 2019, Antalya, Turkey. pp.41-45. ⟨hal-02048506⟩
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ref_biblio
Bruno Fady, Marc Bally, Alberte Bondeau, Francois Carlotti, Anne Chenuil, et al.. Ecological gradients as an evolutionary opportunity for Mediterranean biodiversity. OTMED Final Conference - What kind of environmental transition for the mediterranean region?, Oct 2019, Marseille, France. ⟨hal-03024537⟩
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Mathilde Pitout, Lorène Tosini, Anne Marie Farnet da Silva, Lisa Foli, H. Folzer, et al.. Agir sur la végétation pour réduire les risques liés aux dépôts de déchets miniers : Approche écotechnologique sur le terril du Défens (OHM Bassin Minier de Provence). Séminaire de l’OHM-BMP – 15 novembre 2019, Nov 2019, Fuveau, France. ⟨hal-02408223⟩
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Gérard Thouzeau, Régis Hocdé, Jean-Pierre Beurier, Laurent Borel, Mathieu Coulange, et al.. The French National Committee on Scientific Diving (CNPS): a key actor for developing scientific diving in France. 5th European Conference on Scientific Diving (ECSD), Institute of Oceanology, Polish Academy of Sciences, ​Sopot, Poland, Apr 2019, Sopot, Poland. pp.61-62, ⟨10.23708/fdi:010076263⟩. ⟨hal-02123970⟩
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Book sections

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Elena M. Bennett, Cecile H. Albert, Aaron Ball, Jeffrey Cardille, Karine Dancose, et al.. The Montérégie Connection: Understanding How Ecosystems Can Provide Resilience to the Risk of Ecosystem Service Change. Atlas of Ecosystem Services: Drivers, Risks, and Societal Responses, Springer International Publishing, 2019, 978-3-319-96228-3. ⟨hal-02010820⟩
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Anne Chenuil, Abigail E. Cahill, Numa Délémontey, Elrick Du Salliant Du Luc, Hadrien Fanton. Problems and Questions Posed by Cryptic Species. A Framework to Guide Future Studies. From Assessing to Conserving Biodiversity, pp.77 - 106, 2019, ⟨10.1007/978-3-030-10991-2_4⟩. ⟨hal-03191951⟩
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Quentin Schenkelaars, Amélie Vernale, Laura Fierro-Constain, Carole Borchiellini, Emmanuelle Renard. A Look Back Over 20 Years of Evo-Devo Studies on Sponges: A Challenged View of Urmetazoa. Evolution, Origin of Life, Concepts and Methods, Springer International Publishing, pp.135-160, 2019, ⟨10.1007/978-3-030-30363-1_7⟩. ⟨hal-02640291⟩
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Habilitation à diriger des recherches

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Emmanuelle Renard. Evolution et révolution moléculaires. Evolution [q-bio.PE]. Aix Marseille Université, 2019. ⟨tel-02640512⟩
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Other publications

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Jean-Pierre Féral. L’ESDP – European Scientific Diving Panel - est désormais supporté par MARS network, le réseau européen des instituts de recherche et stations marines. 2019, pp.12-15. ⟨10.13140/RG.2.2.26135.62885⟩. ⟨hal-02107729⟩
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Poster communications

ref_biblio
Axel Bergeon, Samuel Blot, Laurent Caoudal, Sinda Fitouri, Ashley Guez, et al.. ACTING ON THE VEGETATION TO REDUCE THE RISKS RELATED TO MINING WASTE DEPOSITS: ECOTECHNOLOGICAL APPROACH ON THE LIGNITE WASTE HEAP OF "LE DEFENS" (OHM BASSIN MINIER DE PROVENCE). International Symposium of Labex DRIIHM -2019 Inter-Disciplinary Research Facility on Human-Environment Interactions -ANR-11-LABX-0010, Oct 2019, Lyon, France. ⟨hal-02311391⟩
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2018

Journal articles

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Gaït Archambaud‐suard, Emmanuel Corse, Vincent Dubut. Etude du régime alimentaire de l'apron du Rhône dans le Verdon. Courrier scientifique du parc naturel régional du Verdon, 2018, 4, pp.66-88. ⟨hal-03470706⟩
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Alex Baumel, Pascal Mirleau, Juan Viruel, Magda Bou Dagher Kharrat, Stefano La Malfa, et al.. Assessment of plant species diversity associated with the carob tree ( Ceratonia siliqua, Fabaceae) at the Mediterranean scales. Plant Ecology and Evolution, 2018, 151 (2), pp.185-193. ⟨10.5091/plecevo.2018.1423⟩. ⟨hal-01868445⟩
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Hassiba Belahbib, Emmanuelle Renard, Sébastien Santini, Cyril Jourda, Jean-Michel Claverie, et al.. New genomic data and analyses challenge the traditional vision of animal epithelium evolution. BMC Genomics, 2018, 19 (1), pp.393. ⟨10.1186/s12864-018-4715-9⟩. ⟨hal-01951941⟩
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Abigail Cahill, John K Pearman, Angel Borja, Laura Carugati, Susana Carvalho, et al.. A comparative analysis of metabarcoding and morphology-based identification of benthic communities across different regional seas. Ecology and Evolution, 2018, 8 (17), pp.8908-8920. ⟨10.1002/ece3.4283⟩. ⟨hal-01886882⟩
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ref_biblio
Rémi Chappaz, Vincent Dubut. L'apron du Rhône (Zingel asper), un poisson emblématique: Répartition, prospection et dynamique de la population du Verdon. Courrier scientifique du parc naturel régional du Verdon, 2018, 4, pp.54-65. ⟨hal-03470717⟩
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Anne Chenuil, Thomas Saucède, Lenaïg G. Hemery, Marc Eléaume, Jean-Pierre Feral, et al.. Understanding processes at the origin of species flocks with a focus on the marine Antarctic fauna. Biological Reviews, 2018, 93 (1), pp.481-504. ⟨10.1111/brv.12354⟩. ⟨hal-01688786⟩
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Angie Díaz, Karin Gérard, Claudio González-Wevar, Claudia Maturana, Jean-Pierre Feral, et al.. Genetic structure and demographic inference of the regular sea urchin Sterechinus neumayeri (Meissner, 1900) in the Southern Ocean: the role of the last glaciation. PLoS ONE, 2018, 13 (6), pp.e0197611. ⟨10.1371/journal.pone.0197611⟩. ⟨hal-01821689⟩
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Matthieu Ghilardi, David Psomiadis, Valérie Andrieu-Ponel, Maxime Colleu, Pavlos Sotiropoulos, et al.. First evidence of a lake at Ancient Phaistos (Messara Plain, South-Central Crete, Greece): Reconstructing paleoenvironments and differentiating the roles of human land-use and paleoclimate from Minoan to Roman times. The Holocene, 2018, 28 (8), pp.1225-1244. ⟨10.1177/0959683618771473⟩. ⟨hal-01871064⟩
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Claudio González-Wevar, Nicolás Segovia, Sebastián Rosenfeld, Jaime Ojeda, Mathias Hüne, et al.. Unexpected absence of island endemics: Long-distance dispersal in higher latitude sub-Antarctic Siphonaria (Gastropoda: Euthyneura) species. Journal of Biogeography, 2018, 45 (4), pp.874-884. ⟨10.1111/jbi.13174⟩. ⟨hal-01698422⟩
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https://hal.science/hal-01698422/file/2018_Gonzalez-Wevar_Journal%20of%20Biogeography_pr_Unexpected%20absence%20of%20island%20endemics-%20long-distance%20dispersal%20in%20higher%20latitude%20sub-Antarctic%20Siphonaria%20%28Gastropoda%2C%20Euthyneura%29%20species.pdf BibTex
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Charlène Guillaumot, Salomé Fabri-Ruiz, Alexis Martin, Marc Eléaume, Bruno Danis, et al.. Benthic species of the Kerguelen Plateau show contrasting distribution shifts in response to environmental changes. Ecology and Evolution, 2018, 8 (12), pp.6210 - 6225. ⟨10.1002/ece3.4091⟩. ⟨hal-01826922⟩
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https://hal.science/hal-01826922/file/2018_Guillaumot_Ecology_and_Evolution_Benthic%20species%20of%20the%20Kerguelen%20Plateau%20show%20contrasting%20distribution%20shifts%20in%20response%20to%20environmental%20changes.pdf BibTex
ref_biblio
Agnieszka Klonowska, Rémy Melkonian, Lucie Miché, Pierre Tisseyre, Lionel Moulin. Transcriptomic profiling of Burkholderia phymatum STM815, Cupriavidus taiwanensis LMG19424 and Rhizobium mesoamericanum STM3625 in response to Mimosa pudica root exudates illuminates the molecular basis of their nodulation competitiveness and symbiotic evolutionary history. BMC Genomics, 2018, 19 (1), ⟨10.1186/s12864-018-4487-2⟩. ⟨hal-01794087⟩
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https://amu.hal.science/hal-01794087/file/Klonowska18_Transcriptomic%20profiling%20of%20Mimosa%20symbionts.pdf BibTex
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Frederic Medail, Alex Baumel. Using phylogeography to define conservation priorities: The case of narrow endemic plants in the Mediterranean Basin hotspot. Biological Conservation, 2018, 224, pp.258 - 266. ⟨10.1016/j.biocon.2018.05.028⟩. ⟨hal-01851876⟩
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Jérémy Migliore, Alex Baumel, Agathe Leriche, Marianick Juin, Frederic Medail. Surviving glaciations in the Mediterranean region: an alternative to the long-term refugia hypothesis. Botanical Journal of the Linnean Society, 2018, 187 (4), pp.537-549. ⟨10.1093/botlinnean/boy032⟩. ⟨hal-01851862⟩
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Laurent Oxusoff, Pascal Prea, Yvan Perez. A complete logical approach to resolve the evolution and dynamics of mitochondrial genome in bilaterians. PLoS ONE, 2018, 13 (3), pp.e0194334. ⟨10.1371/journal.pone.0194334⟩. ⟨hal-01765687⟩
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Jérôme Prunier, Vincent Dubut, Géraldine Loot, Loïc Tudesque, Simon Blanchet. The relative contribution of river network structure and anthropogenic stressors to spatial patterns of genetic diversity in two freshwater fishes: A multiple-stressors approach. Freshwater Biology, 2018, 63 (1), pp.6 - 21. ⟨10.1111/fwb.13034⟩. ⟨hal-01764118⟩
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Olivier Raymond, Jerome Gouzy, Jérémy Just, Hélène Badouin, Marion Verdenaud, et al.. The Rosa genome provides new insights into the domestication of modern roses. Nature Genetics, 2018, 50 (6), pp.772-777. ⟨10.1038/s41588-018-0110-3⟩. ⟨hal-01798003⟩
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Emmanuelle Renard, Sally Leys, Gert Wörheide, Carole Borchiellini. Understanding Animal Evolution: The Added Value of Sponge Transcriptomics and Genomics. BioEssays, 2018, 40 (9), pp.1700237. ⟨10.1002/bies.201700237⟩. ⟨hal-01951912⟩
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Mathieu Santonja, Quentin Foucault, Anaïs Rancon, Thierry Gauquelin, Catherine Fernandez, et al.. Contrasting responses of bacterial and fungal communities to plant litter diversity in a Mediterranean oak forest. Soil Biology and Biochemistry, 2018, 125, pp.27-36. ⟨10.1016/j.soilbio.2018.06.020⟩. ⟨hal-01864314⟩
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ref_biblio
Juan Viruel, Anne Haguenauer, Marianick Juin, Fatma Mirleau, Delphine Bouteiller, et al.. Advances in genotyping microsatellite markers through sequencing and consequences of scoring methods for Ceratonia siliqua (Leguminosae). Applications in Plant Sciences, 2018, 6 (12), pp.e01201. ⟨10.1002/aps3.1201⟩. ⟨hal-01952501⟩
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https://amu.hal.science/hal-01952501/file/Viruel%20J.%20et%20al.%202018%20Applications%20in%20Plant%20Sciences.pdf BibTex

Conference papers

ref_biblio
Malika L. Aïnouche, Armand Cavé-Radet, Delphine Giraud, Alex Baumel, Blanca Gallego-Tévar, et al.. Genome merger and duplication as springboards for plant invasion: Lessons from Spartina. International Conference on Ecological Sciences, SFEcologie2018, SFEcologie, Oct 2018, Rennes, France. ⟨hal-02436817⟩
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Bruno Fady, Marc Bally, Alberte Bondeau, Francois Carlotti, Anne Chenuil, et al.. Climate change and the evolutionary challenge of Mediterranean biodiversity. ESEB 2018 Evolution conference Montpellier, Aug 2018, Montpellier, France. ⟨10.13140/RG.2.2.35257.62565⟩. ⟨hal-02962496⟩
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Jean-Pierre Féral, Elie Poulin, C. de Ridder, T. Saucède. A field guide to coastal echinoderms of the Kerguelen Islands. 16th International Echinoderm Conference, May 2018, Nogoya, Japan. pp.33-43, ⟨10.11646/zoosymposia.15.1.6⟩. ⟨hal-02321590⟩
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Thomas Saucède, Sébastien Motreuil, Olivier Mathieu, Anne-Lise Santoni, Sébastien Couette, et al.. Changement climatique et suivi de la biodiversité marine côtière aux Iles Kerguelen. 15e Rencontres Bourgogne-Franche-Comté Nature, Changement climatique, humanité et biodiversité, 2018, Dijon, France. pp.273-284, ⟨10.5281/zenodo.3380472⟩. ⟨hal-02097586⟩
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Other publications

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Emmanuelle Renard, Carole Borchiellini. Les éponges: l'une des plus anciennes lignées animales. 2018. ⟨hal-02640405⟩
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Poster communications

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Alex Baumel, Fatma Lakhal-Mirleau, Samuel Pironon, Gonzalo Nieto Feliner, Magda Boudagher Kharrat, et al.. The carob tree at the crossroad of domestication center and refugia. Second Joint Congress on Evolutionary Biology, Aug 2018, Montpellier, France. ⟨hal-04533957⟩
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Bruno Fady, Alberte Bondeau, Marc Bally, Wolfgang Cramer, Thierry Gauquelin, et al.. Climate change and the evolutionary challenge of Mediterranean biodiversity. 2. Joint Congress on Evolutionary Biology (EVOLUTION 2018), Aug 2018, Montpellier, France. 2018. ⟨hal-02737804⟩
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Reports

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Lara Dixon, Alex Baumel, Marine Robichon, Camille Beaulier, Marianick Juin, et al.. Originalité d'Adonis vernalis L. en Provence Bilan stationnel et diversité génétique. Conservatoire botanique national méditéranéen de porquerolle. 2018. ⟨hal-04476240⟩
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2017

Journal articles

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Mohamed Ait Hamza, Hicham Lakhtar, Hafssa Tazi, Abdelmajid Moukhli, Odile Fossati-Gaschignard, et al.. Diversity of nematophagous fungi in Moroccan olive nurseries: Highlighting prey-predator interactions and efficient strains against root-knot nematodes. Biological Control, 2017, 114, pp.14-23. ⟨10.1016/j.biocontrol.2017.07.011⟩. ⟨hal-01681583⟩
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Angeline Bertin, Nicolas Gouin, Alex Baumel, Ernesto Gianoli, Juan Serratosa, et al.. Genetic variation of loci potentially under selection confounds species-genetic diversity correlations in a fragmented habitat. Molecular Ecology, 2017, 26 (2), pp.431 - 443. ⟨10.1111/mec.13923⟩. ⟨hal-01605033⟩
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Abigail E. Cahill, Sophie Dubois, Zoheir Bouzaza, D. Aurelle, Emilie Boissin, et al.. A multispecies approach reveals hot spots and cold spots of diversity and connectivity in invertebrate species with contrasting dispersal modes. Molecular Ecology, 2017, 26 (23), pp.6563-6577. ⟨10.1111/mec.14389⟩. ⟨hal-01681650⟩
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Emmanuel Corse, Emese Meglecz, Gait Archambaud, Morgane Ardisson, Jean-François Martin, et al.. A from-benchtop-to-desktop workflow for validating HTS data and for taxonomic identification in diet metabarcoding studies. Molecular Ecology Resources, 2017, 17 (6), pp.e146-e159. ⟨10.1111/1755-0998.12703⟩. ⟨hal-01681595⟩
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Carolina Crisci, J. -B. Ledoux, K. Mokhtar-Jamai, Marc Bally, N. Bensoussan, et al.. Regional and local environmental conditions do not shape the response to warming of a marine habitat-forming species. Scientific Reports, 2017, 7 (1), pp.5069. ⟨10.1038/s41598-017-05220-4⟩. ⟨hal-01591643⟩
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Romain David, Jean-Pierre Féral, Sophie Archambeau, Fanny Arnaud, David Auber, et al.. IndexMEED cases studies using "Omics" data with graph theory. Biodiversity Information Science and Standards, 2017, TDWG 2017 - Proceedings, 1 (2), pp.340-361. ⟨10.3897/tdwgproceedings.1.20740⟩. ⟨hal-01761535⟩
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Romain David, Loup Bernard, Cyrille Blanpain, Alrick Dias, Jean-Pierre Feral, et al.. Visualisation de données sous forme de graphes en archéologie. Rencontre opérationnelle des archéologues d’ArkeoGIS et des écologues d’IndexMed . Archéologies numériques, 2017, 17-1 (1), ⟨10.21494/ISTE.OP.2017.0166⟩. ⟨hal-01617580⟩
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Jean-Pierre Féral, Thomas Saucède, Nadia Améziane. PROTEKER phase 1: l’installation. Un observatoire sous-marin des effets du changement global sur les communautés benthiques côtières de l’Archipel des Kerguelen. Revue Australe et Polaire [AMAEPF], 2017, 81, pp.29-34. ⟨10.5281/zenodo.4719360⟩. ⟨hal-03468725⟩
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https://hal.science/hal-03468725/file/2017_F%C3%A9ral_Revue%20Australe%20et%20Polaire-AMAEPF_PROTEKER%20PHASE%201%2C%20L%E2%80%99INSTALLATION_Un%20observatoire%20sous-marin%20des%20effets%20du%20changement%20global%20sur%20les%20communaut%C3%A9s%20benthiques%20c%C3%B4ti%C3%A8res%20de%20l%E2%80%99archipel%20des%20Kerguelen.pdf BibTex
ref_biblio
Laura Fierro-Constain, Quentin Schenkelaars, Eve Gazave, Anne Haguenauer, Caroline Rocher, et al.. The Conservation of the Germline Multipotency Program, from Sponges to Vertebrates: A Stepping Stone to Understanding the Somatic and Germline Origins. Genome Biology and Evolution, 2017, 9 (3), pp.474-488. ⟨10.1093/gbe/evw289⟩. ⟨hal-01680437⟩
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Ahlam Hamim, Lucie Miche, Ahmed Douaik, Rachid Mrabet, Ahmed Ouhammou, et al.. Diversity of fungal assemblages in roots of Ericaceae in two Mediterranean contrasting ecosystems. Comptes Rendus Biologies, 2017, 340 (4), pp.226-237. ⟨10.1016/j.crvi.2017.02.003⟩. ⟨hal-01681523⟩
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Zined Marzouk, D. Aurelle, Khaled Said, Anne Chenuil. Cryptic lineages and high population genetic structure in the exploited marine snail Hexaplex trunculus (Gastropoda: Muricidae). Biological Journal of the Linnean Society, 2017, 122 (2), pp.411-428. ⟨10.1093/biolinnean/blx070⟩. ⟨hal-01631348⟩
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Claudia S. Maturana, Karin Gérard, Angie Díaz, Bruno David, Jean-Pierre Feral, et al.. Mating system and evidence of multiple paternity in the Antarctic brooding sea urchin Abatus agassizii.. Polar Biology, 2017, 40 (4), pp.787-797. ⟨10.1007/s00300-016-2001-3⟩. ⟨hal-01516148⟩
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M. Pouget, Alex Baumel, K. Diadema, F. Médail. Conservation unit allows assessing vulnerability and setting conservation priorities for a Mediterranean endemic plant within the context of extreme urbanization. Biodiversity and Conservation, 2017, 26 (2), pp.293-307. ⟨10.1007/s10531-016-1242-3⟩. ⟨hal-01473776⟩
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Jérôme Prunier, Vincent Dubut, Lounes Chikhi, Simon Blanchet. Contribution of spatial heterogeneity in effective population sizes to the variance in pairwise measures of genetic differentiation. Methods in Ecology and Evolution, 2017, 8 (12), pp.1866-1877. ⟨10.1111/2041-210X.12820⟩. ⟨hal-01681597⟩
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Axel G. Rossberg, Laura Uusitalo, Torsten Berg, Anastasija Zaiko, Anne Chenuil, et al.. Quantitative criteria for choosing targets and indicators for sustainable use of ecosystems. Ecological Indicators, 2017, 72, pp.215-224. ⟨10.1016/j.ecolind.2016.08.005⟩. ⟨hal-01631349⟩
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Mathieu Santonja, Anaïs Rancon, Nathalie Fromin, Virginie Baldy, Stephan Hättenschwiler, et al.. Plant litter diversity increases microbial abundance, fungal diversity, and carbon and nitrogen cycling in a Mediterranean shrubland. Soil Biology and Biochemistry, 2017, 111, pp.124-134. ⟨10.1016/j.soilbio.2017.04.006⟩. ⟨hal-01520650⟩
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Stéphane Sartoretto, Thomas Schohn, Carlo Nike Bianchi, Carla Morri, Joaquim Garrabou, et al.. An integrated method to evaluate and monitor the conservation state of coralligenous habitats: The INDEX-COR approach. Marine Pollution Bulletin, 2017, 120 (1-2), pp.222-231. ⟨10.1016/j.marpolbul.2017.05.020⟩. ⟨hal-01541141⟩
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Quentin Schenkelaars, Marine Pratlong, Laurent Kodjabachian, Laura Fierro-Constain, Jean Vacelet, et al.. Animal multicellularity and polarity without Wnt signaling. Scientific Reports, 2017, 7 (1), pp.1-11/15383. ⟨10.1038/s41598-017-15557-5⟩. ⟨hal-01680462⟩
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A. A. T. Weber, L. Abi-Rached, Nicolas Galtier, A. Bernard, J. I. Montoya-Burgos, et al.. Positive selection on sperm ion channels in a brooding brittle star: consequence of life-history traits evolution. Molecular Ecology, 2017, 26 (14), pp.3744-3759. ⟨10.1111/mec.14024⟩. ⟨hal-01573765⟩
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Conference papers

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Jean-Pierre Féral, Elie Poulin, Claudio A. González-Wevar, Nadia Améziane, Charlène Guillaumot, et al.. Long-term monitoring of coastal benthic habitats in the Kerguelen Islands: a legacy of decades of marine biology research. Symposium on Kerguelen Plateau Marine Ecosystem and Fisheries, Australian Antarctic Division, Nov 2017, Hobart, Tasmania, Australia. pp.383-402, ⟨10.5281/zenodo.3249143⟩. ⟨hal-02162628⟩
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Víctor Méndez Muñoz, Anna Cohen-Nabeiro, Romain David, Vicente José Ivars Camáñez, Alfons Nonell-Canals, et al.. Analysis on the Graph Techniques for Data-mining and Visualization of Heterogeneous Biodiversity Data Sets. Complexis 2017, Apr 2017, Porto, Portugal. pp.144 - 151, ⟨10.5220/0006379701440151⟩. ⟨hal-01541140⟩
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Thomas Saucède, Charlène Guillaumot, Loïc Michel, Salomé Fabri-Ruiz, Alexis Bazin, et al.. Modelling species response to climate change in sub-Antarctic islands: echinoids as a case study for the Kerguelen Plateau. The Kerguelen Plateau: Marine Ecosystems and Fisheries, Australian Antarctic Division, Nov 2017, Hobart, Tasmania, Australia. pp.95-116, ⟨10.5281/zenodo.3251680⟩. ⟨hal-02162630⟩
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Poster communications

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Romain David, Jean-Pierre Féral, Anne-Sophie Archambeau, Fanny Arnaud, David Auber, et al.. Results of IndexMed GRAIL Days 2016: How to use standards to build GRAphs and mIne data for environmentaL research? IndexMeed consortium for data mining in ecology. RDA Ninth Plenary Meeting "Data Infrastructures for Open Science", Apr 2017, Barcelona, Spain. , 2017, ⟨10.13140/RG.2.2.32504.44806⟩. ⟨hal-02295974⟩
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Preprints, Working Papers, ...

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Laure Thierry de Ville d'Avray, Dominique Ami, Anne Chenuil, Romain David, Jean-Pierre Feral. Application of the Ecosystem Service Concept to a Local-Scale: The Cases of Coralligenous Habitats in the North-Western Mediterranean Sea. 2017. ⟨halshs-01624589⟩
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2016

Journal articles

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Guillem Chust, Ernesto Villarino, Anne Chenuil, Xabier Irigoien, Nihayet Bizsel, et al.. Dispersal similarly shapes both population genetics and community patterns in the marine realm. Scientific Reports, 2016, 6, ⟨10.1038/srep28730⟩. ⟨hal-01444635⟩
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Roberto Danovaro, Laura Carugati, Berzano Marco, Abigail E. Cahill, Susana de Carvalho Spinola, et al.. Implementing and Innovating Marine Monitoring Approaches for Assessing Marine Environmental Status.. Frontiers in Marine Science, 2016, 3, pp.213. ⟨10.3389/fmars.2016.00213⟩. ⟨hal-01448726⟩
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Bruno David, Thomas Saucède, Anne Chenuil, Emilie Steimetz, Chantal de Ridder. The taxonomic challenge posed by the Antarctic echinoids Abatus bidens and Abatus cavernosus (Schizasteridae, Echinoidea).. Polar Biology, 2016, 39 (5), pp.897-912. ⟨10.1007/s00300-015-1842-5⟩. ⟨hal-01310170⟩
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Emilie Egea, Bruno David, Thérèse Choné, Bernard Laurin, Jean-Pierre Féral, et al.. Morphological and genetic analyses reveal a cryptic species complex in the echinoid Echinocardium cordatum and rule out a stabilizing selection explanation.. Molecular Phylogenetics and Evolution, 2016, 94 (Pt A), pp.207-220. ⟨10.1016/j.ympev.2015.07.023⟩. ⟨hal-01205849⟩
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Jean-Pierre Feral, Thomas Saucède, Elie Poulin, Christian Marschal, Gilles Marty, et al.. PROTEKER: implementation of a submarine observatory at the Kerguelen islands (Southern Ocean). Underwater Technology, 2016, 34 (1), pp.3-10. ⟨10.3723/ut.34.003⟩. ⟨hal-01541146⟩
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Vasilis Gerovasileiou, Thanos Dailianis, Emmanouela Panteri, Nikitas Michalakis, Giulia Gatti, et al.. CIGESMED for divers: Establishing a citizen science initiative for the mapping and monitoring of coralligenous assemblages in the Mediterranean Sea. Biodiversity Data Journal, 2016, 54 (e8692), ⟨10.3897/BDJ.4.e8692⟩. ⟨hal-01392025⟩
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Claudio A. González-Wevar, Mathias Hüne, Sebastián Rosenfeld, Thomas Saucède, Jean-Pierre Féral, et al.. Patterns of genetic diversity and structure in Antarctic and sub-Antarctic Nacella (Patellogastropoda: Nacellidae) species.. Biodiversity, 2016, 17 (1-2), pp.46-55. ⟨10.1080/14888386.2016.1181573⟩. ⟨hal-01408790⟩
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Laurent Hardion, Pierre-Jean Dumas, Farah Abdel-Samad, Magda Bou Dagher Kharrat, Bostjan Surina, et al.. Geographical isolation caused the diversification of the Mediterranean thorny cushion-like Astragalus L. sect. Tragacantha DC. (Fabaceae). Molecular Phylogenetics and Evolution, 2016, 97, pp.187--195. ⟨10.1016/j.ympev.2016.01.006⟩. ⟨hal-01444679⟩
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Jon Thomassen Hestetun, Jean Vacelet, Nicole Boury-Esnault, Carole Borchiellini, Michelle Kelly, et al.. The systematics of carnivorous sponges. Molecular Phylogenetics and Evolution, 2016, 94 (A), pp.327-345. ⟨10.1016/j.ympev.2015.08.022⟩. ⟨hal-01444667⟩
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Zined Marzouk, Anne Chenuil, Hager Blel, Khaled Saïd. Morphometric Variation of Fishery-Exploited Muricidae (Hexaplex trunculus) in the Mediterranean Sea and the Northeastern Atlantic Ocean: Implications for Stock Identification. Turkish Journal of Fisheries and Aquatic Sciences, 2016, 16 (2), pp.327--338. ⟨10.4194/1303-2712-v16_2_13⟩. ⟨hal-01444628⟩
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M. Pouget, S. Youssef, P. -J. Dumas, T. Baumberger, A. San Roman, et al.. Spatial mismatches between plant biodiversity facets and evolutionary legacy in the vicinity of a major Mediterranean city. Ecological Indicators, 2016, 60, pp.736-745. ⟨10.1016/j.ecolind.2015.07.017⟩. ⟨hal-01444052⟩
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Quentin Schenkelaars, Omar Quintero, Chelsea Hall, Laura Fierro-Constain, Emmanuelle Renard, et al.. ROCK inhibition abolishes the establishment of the aquiferous system in Ephydatia muelleri (Porifera, Demospongiae). Developmental Biology, 2016, 412 (2), pp.298 - 310. ⟨10.1016/j.ydbio.2016.02.026⟩. ⟨hal-01771012⟩
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Quentin Schenkelaars, Laura Fierro-Constain, Emmanuelle Renard, Carole Borchiellini. Retracing the path of planar cell polarity. BMC Evolutionary Biology, 2016, 16, ⟨10.1186/s12862-016-0641-0⟩. ⟨hal-01444062⟩
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Ludmila Sromek, Didier Forcioli, Rafal Lasota, Paola Furla, Katarzyna Tarnowska-Marini, et al.. Strong genetic structuring of the cockle Cerastoderma glaucum across Europe: new insights from an intronic marker and multivariate analysis. Journal of Molluscan Studies, 2016, 82 (4), pp.515--524. ⟨10.1093/mollus/eyw019⟩. ⟨hal-01444646⟩
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Conference papers

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Malika L. Aïnouche, Alex Baumel, Blanca Gallego-Tévar, Jesus Castillo, Mathieu Rousseau-Gueutin, et al.. Unending hybridization and polyploid speciation stories: Lessons from Spartina (Poaceae). XV OPTIMA Meeting, Organization for the Phyto-Taxonomic Investigation of the Mediterranean Area, Jun 2016, Montpellier, France. ⟨hal-02422822⟩
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Romain David, Jean-Pierre Féral, Thierry Tatoni. Architecture, concepts et services d'un système d'indexation de données distribuées pour l'observation à large échelle en écologie marine. 32ème Conférence sur la Gestion de Données - Principes, Technologies et Applications, laboratoire d’Informatique et d’Automatique pour les Systèmes (LIAS), Nov 2016, POITIERS, France. ⟨hal-01426497⟩
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Romain David, Jean-Pierre Feral, Anne Archambeau, Nicolas Bailly, Cyrille Blanpain, et al.. IndexMed projects: new tools using the CIGESMED DataBase on Coralligenous for indexing, visualizing and data mining based on graphs. 8th International Congress on Environmental Modelling and Software, Toulouse, France, Sabine Sauvage, José-Miguel Sánchez-Pérez, Andrea Rizzoli (Eds.), Jul 2016, Toulouse, France. pp.32, ⟨10.5281/zenodo.6047140⟩. ⟨hal-01425559⟩
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Laurent Hardion, Pierre-Jean Dumas, Farah Abdel Samad, Magda Bou Dagherkharrat, Laurence Affre, et al.. Origine de l'Astragale de Marseille. Séminaire Astragale de Marseille, IMBE, Nov 2016, Marseille, France. ⟨hal-04476250⟩
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Book sections

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Hervé Macarie, Igor Novak, Isabel Sastre-Conde, Yoan Labrousse, Alain Archelas, et al.. Theoretical approach to chlordecone biodegradation. Magalie Lesueur Jannoyer, Philippe Cattan, Thierry Woignier, Florence Clostre. Crisis management of chronic pollution : contaminated soil and human health, CRC Press, pp.191-209, 2016, 9781498737838. ⟨ird-01559694v3⟩
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Other publications

ref_biblio
Jean-Pierre Feral, Jean-Pierre Beurier, Christian Marschal, Gilles Marty, Sébastien Motreuil, et al.. Kerguelen, un archipel sous haute surveillance. 2016, pp.33-39. ⟨hal-01541147⟩
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https://hal.science/hal-01541147/file/2016_F%C3%A9ral_Esp%C3%A8ces_Kerguelen%2C%20un%20archipel%20sous%20haute%20surveillance.pdf BibTex
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Jean-Pierre Feral, Thomas Saucède, Nadia Améziane. PROTEKER phase 1: l’installation. Un observatoire sous-marin des effets du changement global sur les communautés benthiques côtières de l’Archipel des Kerguelen. 2016, pp. 28-35. ⟨10.13140/RG.2.2.32380.13448⟩. ⟨hal-01448867⟩
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Books

ref_biblio
H. Sanguin, F. Mahé, P. Tisseyre, E. Tournier, Lahcen Ouahmane, et al.. Are mycorrhizal-bacterial community networks impacted by the sexual type of their host tree?. agritrop.cirad.fr, 2016. ⟨hal-01474007⟩
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Juan Viruel, Frédéric Médail, M. Juin, A. Hagenauer, Gonzalo Nieto Feliner, et al.. A biogeographical inquiry to decipher the ecological status of carob populations (Ceratonia siliqua L., Leguminosae) and their history prior to Mediterranean civilizations. agritrop.cirad.fr, 2016. ⟨hal-01474017⟩
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Poster communications

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Juan Viruel, Frederic Medail, Marianick Juin, Anne Haguenauer, Gonzalo Nieto Feliner, et al.. Mediterranean carob populations, native or naturalized? A continuing riddle.. OPTIMA XV, Jun 2016, Montpellier, France. ⟨hal-01794260⟩
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Juan Viruel, Frédéric Médail, Marianick Juin, Anne Haguenauer, Gonzalo Nieto Feliner, et al.. Mediterranean carob populations, native or naturalized ? A continuing riddle. XV OPTIMA Meeting, 2016, Montpellier, France. ⟨hal-03617000⟩
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Reports

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Jean-Pierre Feral, Christos Arvanitidis, Anne Chenuil, Melih Ertan Çinar, Romain David, et al.. CIGESMED : Coralligenous based Indicators to evaluate and monitor the "Good Environmental Status" of the Mediterranean coastal waters. [Research Report] ANR. 2016, 107 pp. ⟨hal-01448881⟩
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ref_biblio
Giulia Gatti, Laure Thierry de Ville d'Avray, Romain David, Dimitriadis Charampalos, Vasilis Gerovasileiou, et al.. CIGESMED for divers - Citizen Science for CIGESMED. [Technical Report] IMBE Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale. 2016. ⟨hal-02156469⟩
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2015

Journal articles

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Patrick Al Hayek, Jean-Paul Maalouf, Alex Baumel, Magda Bou Dagher-Kharrat, Frédéric Médail, et al.. Differential effects of contrasting phenotypes of a foundation legume shrub drive plant-plant interactions in a Mediterranean mountain. Journal of Vegetation Science, 2015, 26 (2), pp.373--384. ⟨10.1111/jvs.12246⟩. ⟨hal-01445185⟩
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E Boissin, E Egea, Jean-Pierre Féral, A. Chenuil. Contrasting population genetic structures in Amphipholis squamata, a complex of brooding, self-reproducing sister species sharing life history traits. Marine Ecology Progress Series, 2015, 539, p. 165-177. ⟨10.3354/meps11480⟩. ⟨hal-01238310⟩
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Xi Chen, Lucie Miche, Sabrina Sachs, Qi Wang, Anna Buschart, et al.. Rice responds to endophytic colonization which is independent of the common symbiotic signaling pathway. New Phytologist, 2015, 208 (2), pp.531-543. ⟨10.1111/nph.13458⟩. ⟨hal-01791867⟩
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Alexander Ereskovsky, Ilya E. Borisenko, Pascal Lapébie, Eve Gazave, Daria B. Tokina, et al.. Oscarella lobularis (Homoscleromorpha, Porifera) Regeneration: Epithelial Morphogenesis and Metaplasia. PLoS ONE, 2015, pp.1-28. ⟨10.1371/journal.pone.0134566⟩. ⟨hal-01198713⟩
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K Gerard, C Roby, N Bierne, Philippe Borsa, J.-P Féral, et al.. Does natural selection explain the fine scale genetic structure at the nuclear exon Glu-5' in blue mussels from Kerguelen ?. Ecology and Evolution, 2015, 5, pp.1456-1473. ⟨10.1002/ece3.1421⟩. ⟨ird-01366543⟩
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Jean-Baptiste Ledoux, D. Aurelle, Nathaniel Bensoussan, Christian Marschal, Jean-Pierre Feral, et al.. Potential for adaptive evolution at species range margins: contrasting interactions between red coral populations and their environment in a changing ocean. Ecology and Evolution, 2015, 5 (1178-1192), ⟨10.1002/ece3.1324⟩. ⟨hal-01219326⟩
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Matthew G. E. Mitchell, Elena M. Bennett, Andrew Gonzalez, Martin J. Lechowicz, Jeanine M. Rhemtulla, et al.. The Monteregie Connection: linking landscapes, biodiversity, and ecosystem services to improve decision making. Ecology and Society, 2015, 20 (4), ⟨10.5751/ES-07927-200415⟩. ⟨hal-01444848⟩
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Delphine Muths, Pierre-Alexandre Rastorgueff, Marjorie Selva, Pierre Chevaldonne. Local scale connectivity in the cave-dwelling brooding fish Apogon imberbis. Journal of Sea Research (JSR), 2015, 95, pp.70--74. ⟨10.1016/j.seares.2014.10.009⟩. ⟨hal-01445187⟩
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Eric Pante, Nicolas Puillandre, Amélia Viricel, Sophie Arnaud-Haond, D. Aurelle, et al.. Species are hypotheses: avoid connectivity assessments based on pillars of sand. Molecular Ecology, 2015, 24 (3), pp.525-544. ⟨hal-02002440⟩
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Pierre-Alexandre Rastorgueff, Caroline Rocher, Marjorie Selva, Pierre Chevaldonne. Preliminary DNA-based diet assessment of a gutless carnivore, the sponge Asbestopluma hypogea. Journal of Experimental Marine Biology and Ecology, 2015, 467, pp.108--114. ⟨10.1016/j.jembe.2015.02.014⟩. ⟨hal-01445191⟩
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Thomas Saucède, Angie Díaz, Benjamin Pierrat, Javier Sellanes, Bruno David, et al.. The phylogenetic position and taxonomic status of Sterechinus bernasconiae Larrain, 1975 (Echinodermata, Echinoidea), an enigmatic Chilean sea urchin.. Polar Biology, 2015, 38 (8), pp.1223-1237. ⟨10.1007/s00300-015-1689-9⟩. ⟨hal-01178233⟩
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Quentin Schenkelaars, Laura Fierro-Constain, Emmanuelle Renard, April L. Hill, Carole Borchiellini. Insights into Frizzled evolution and new perspectives. Evolution and Development, 2015, 17 (2), pp.160--169. ⟨10.1111/ede.12115⟩. ⟨hal-01444864⟩
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J. Theuerkauf, R. Kuehn, R. Gula, A. Sztencel-Jablonka, Herve Jourdan, et al.. Invasion history affects genetic structure in island rat populations. Journal of Zoology, 2015, 295 (3), pp.197--205. ⟨10.1111/jzo.12206⟩. ⟨hal-01445183⟩
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Giulio Torrente, Jean Coignus, Sophie Renard, Alexandre Vernhet, Gilles Reimbold, et al.. Physically-based extraction methodology for accurate MOSFET degradation assessment. Microelectronics Reliability, 2015, 55 (9-10), pp.1417-1421. ⟨10.1016/j.microrel.2015.06.063⟩. ⟨hal-01947649⟩
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A. A. -T. Weber, B. Merigot, S. Valiere, A. Chenuil. Influence of the larval phase on connectivity: strong differences in the genetic structure of brooders and broadcasters in the Ophioderma longicauda species complex. Molecular Ecology, 2015, 24 (24), pp.6080--6094. ⟨10.1111/mec.13456⟩. ⟨hal-01445211⟩
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Conference papers

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Romain David, Jean-Pierre Feral, Sophie Gachet, Alrick Dias, Cyrille Blanpain, et al.. A first prototype for indexing, visualizing and mining heterogeneous data in Mediterranean ecology: within the IndexMed consortium interdisciplinary framework. 11th International Conference on Signal-Image Technology & Internet-Based Systems (SITIS), Kokou Yetongnon, Albert Dipanda, University Of Bourgogne, France and Richard Chbeir, University of Pau, France, Nov 2015, Bangkok, Thailand. pp. 232-239, ⟨10.1109/SITIS.2015.119⟩. ⟨hal-01433600⟩
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Poster communications

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Aurélien De Jode, Sophie Dubois, Zinovia Erga, Dorian Guillemain, Romain David, et al.. Understanding ecological functionning of ecological habitats, and building New Indicators based on Genetic Tools to assess their GES (Good Environmental Status).. OT-MED, Feb 2015, Marseille, France. 2015. ⟨hal-03663687⟩
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Reports

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Jean-Michel Olivier, Nicolas Lamouroux, Maxence Forcellini, Jérémie Riquier, Hervé Piégay, et al.. Suivi scientifique du programme de restauration hydraulique et écologique du Rhône. Un observatoire dynamique de l'état écologique du fleuve. Rapport d'avancement 2015.. [Rapport de recherche] IRSTEA; Université Lyon 1; CNRS; Université de Genève; Université Lyon 2; Université Lyon 3; ENS de Lyon; EZUS - Université Lyon 1. 2015. ⟨halshs-01319231⟩
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Preprints, Working Papers, ...

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Romain David, Jean-Pierre Feral, Cyrille Blanpain. Ecological Data Preservation in the context of IndexMed -PREDON 2015. 2015. ⟨hal-01620554⟩
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2014

Journal articles

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Angèle Bossu, Valérie Bertaudière-Montès, Vincent Dubut, Stephanie Manel. Microsatellite Primers in Parietaria judaica (Urticaceae) to Assess Genetic Diversity and Structure in Urban Landscapes. Applications in Plant Sciences, 2014, 2 (9), pp.1400036. ⟨10.3732/apps.1400036⟩. ⟨hal-01769473⟩
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Samah Gasmi, Gabriel Nève, Nicolas Pech, Sada Tekaya, André Gilles, et al.. Evolutionary history of Chaetognatha inferred from molecular and morphological data: a case study for body plan simplification. Frontiers in Zoology, 2014, 11 (1), pp.84. ⟨10.1186/s12983-014-0084-7⟩. ⟨hal-01785760⟩
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A. Kharrat-Souissi, S. Siljak-Yakovlev, S. C. Brown, Alex Baumel, F. Torre, et al.. The polyploid nature of Cenchrus ciliaris L. (Poaceae) has been overlooked: new insights for the conservation and invasion biology of this species - a review. Rangeland Journal, 2014, 36 (1), pp.11-23. ⟨10.1071/rj13043⟩. ⟨hal-01451805⟩
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Emese Meglécz, Nicolas Pech, André Gilles, Vincent Dubut, Pascal Hingamp, et al.. QDD version 3.1: a user-friendly computer program for microsatellite selection and primer design revisited: experimental validation of variables determining genotyping success rate. Molecular Ecology Resources, 2014, 14 (6), pp.1302-1313. ⟨10.1111/1755-0998.12271⟩. ⟨hal-02356473⟩
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Jonathan Romiguier, P Gayral, M Ballenghien, Arnaud Bernard, V Cahais, et al.. Comparative population genomics in animals uncovers the determinants of genetic diversity. Nature, 2014, 515 (7526), pp.261-263. ⟨10.1038/nature13685⟩. ⟨hal-01313724⟩
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Alain Soler, Marc Lebrun, Yoan Labrousse, Thierry Woignier. Quantification de la chlordécone dans l'eau, les sols et les plantes par micro-extraction en phase solide et chromatographie gazeuse couplée à un spectromètre de masse (SPME/GC-MS & MS/MS). Fruits, 2014, 69 (4), pp.325-339. ⟨10.1051/fruits/2014021⟩. ⟨hal-02066639⟩
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Alexandra Anh-Thu Weber, Sabine Stohr, Anne Chenuil. Genetic data, reproduction season and reproductive strategy data support the existence of biological species in Ophioderma longicauda. Comptes Rendus Biologies, 2014, 337 (10), pp.553-560. ⟨10.1016/j.crvi.2014.07.007⟩. ⟨hal-01631350⟩
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Conference papers

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Malika Ainouche, Armel Salmon, Mathieu Rousseau-Gueutin, Julien Boutte, Hélène Rousseau, et al.. Hybridation, polyploidie et evolution des génomes : le cas des spartines envahissant les marais salés. Colloque de lancement du Groupement de Recherches CNRS « Invasions Biologiques », UMR CNRS 6553 ECOBIO, Oct 2014, Rennes, France. ⟨hal-01108368⟩
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Melih Ertan Çinar, Jean-Pierre Feral, Christos Arvanitidis, Romain David, Taskin Ergun, et al.. Preliminary assessment of macrobenthic assemblages of coralligenous habitats across the Mediterranean Sea. 2nd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions , RAC/ASP, Oct 2014, Portorož, Slovenia. pp.207-208. ⟨hal-01790493⟩
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Romain David, Christos Arvanitidis, Melih Ertan Çinar, Stéphane Sartoretto, Sophie Dubois, et al.. CIGESMED. Protocols: how to implement a multidisciplinary approach on a large scale for coralligenous habitats surveys. RAC/SPA 2nd Mediterranean Symp. on the Conservation of coralligenous and other calcareous bio-concretions, RAC/SPA, Oct 2014, Portorož, Slovenia. pp.66-71, ⟨10.13140/2.1.1895.0086⟩. ⟨hal-01620550⟩
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Romain David, Christos Arvanitidis, Melih Ertan Ҫinar, Stéphane Sartoretto, A Doğan, et al.. CIGESMED habitat's characterization: a simple ans reusable typology at the Mediterranean scale . RAC/ASP 2nd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions, Oct 2014, Portorož, Slovenia. pp.211-212. ⟨hal-01620541⟩
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ref_biblio
Romain David, Sophie Dubois, Zinovia Erga, Dorian Guillemain, Laure Thierry de Ville d'Avray, et al.. CIGESMED’s protocol and network (Coralligenous basEd. Indicators to evaluate and monitor the “Good Environmental Status” of Mediterranean coastal waters). 5th International Symposium Monitoring of Mediterranean coastal areas: problems and measurement techniques, CNR-IBIMET Firenze, Jun 2014, Livorno, Italy. pp.828-843. ⟨hal-01790542⟩
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Jean-Pierre Feral, Christos Arvanitidis, Anne Chenuil-Maurel, Melih Ertan Çinar, Romain David, et al.. CIGESMED: Coralligenous based indicators to evaluate and monitor the "good environmental statut" of the Mediterranean coastal waters, a SeasEra project. 2nd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions, Oct 2014, Portorož, Slovenia. ⟨hal-01620607⟩
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Hervé Macarie, Yoan Labrousse, Aurélie Amic, Alain Soler, Sébastien Bristeau, et al.. Devenir de la chlordécone en conditions méthanogéniques. 44e Congrès du Groupe Français des Pesticides, Protection des cultures et santé environnementale : héritages et conceptions nouvelles, Groupe Français des Pesticides, May 2014, Schoelcher (Martinique), France. ⟨ird-03725191⟩
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S. Ruitton, Sebastien Personnic, Enric Ballesteros, Denise Bellan-Santini, Charles-François Boudouresque, et al.. An ecosystem-based approach to assess the status of the Mediterranean coralligenous habitat.. RAC/SPA 2nd Mediterranean Symp. on the Conservation of coralligenous and other calcareous bio-concretions, RAC/SPA, Oct 2014, Portorož Slovenia. pp.153-158. ⟨hal-01790546⟩
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Stéphane Sartoretto, Romain David, D. Aurelle, Anne Chenuil-Maurel, Dorian Guillemain, et al.. AN INTEGRATED APPROACH TO EVALUATE AND MONITOR THE CONSERVATION STATE OF CORALLIGENOUS BOTTOMS: THE INDEX-COR METHOD. Conference: 2nd Mediterranean Symposium on the conservation of Coralligenous & other Calcareous Bio-Concretions, Oct 2014, Portorož, Slovenia. ⟨10.13140/2.1.3180.6405⟩. ⟨hal-01620618⟩
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Book sections

ref_biblio
Romain David, Sophie Dubois, Zinovia Erga, Dorian Guillemain, Laure Thierry de Ville d'Avray, et al.. CIGESMED’s protocol and network (Coralligenous based Indicators to evaluate and monitor the “Good Environmental Status” of Mediterranean coastal waters). CNR-IBIMET Proceedings of Fifth International Symposium MONITORING OF MEDITERRANEAN COASTAL AREAS: PROBLEMS AND MEASUREMENT TECHNIQUES, , pp.828-843, 2014, 978-88-95597-19-5. ⟨hal-01620518⟩
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Other publications

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Alex Baumel. La sabline de Provence, témoin multimillénaire des lapiez provençaux. 2014, pp.6-10. ⟨hal-03616903⟩
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Chris Smith, Nadia Papadopoulou, Katerina Sevastou, Anita Franco, Heliana Teixeira, et al.. Report on identification of keystone species and processes across regional seas. 2014, pp.1-103. ⟨10.131140/2.1.2093.3929⟩. ⟨hal-01790558⟩
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Poster communications

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Kelly Brener, Jeremie Vidal-Dupiol, Mehdi Adjeroud, Pascal Romans, Julien Loubet, et al.. Dynamique de l’holobionte corallien et plasticité transcriptomique : variabilité interspécifique, interpopulationnelle et interindividuelle. Journée de doctoriales Aragoyennes, Apr 2014, Banyuls sur Mer, France. ⟨hal-01134460⟩
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Reports

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Jean-Michel Olivier, Nicolas Lamouroux, Maxence Forcellini, Jérémie Riquier, Hervé Piégay, et al.. Suivi scientifique du programme de restauration hydraulique et écologique du Rhône. Un observatoire dynamique de l'état écologique du fleuve. Rapport d'avancement 2014.. [Rapport de recherche] IRSTEA; Université Lyon 1; CNRS; Université de Genève; Université Lyon 2; Université Lyon 3; ENS de Lyon; EZUS - Université Lyon 1. 2014. ⟨halshs-01319234⟩
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2013

Journal articles

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Emmanuel Corse, Jeannine Rampal, Corinne Cuoc, Nicolas Pech, Yvan Perez, et al.. Phylogenetic Analysis of Thecosomata Blainville, 1824 (Holoplanktonic Opisthobranchia) Using Morphological and Molecular Data. PLoS ONE, 2013, 8 (4), pp.59439 - 59439. ⟨10.1371/journal.pone.0059439⟩. ⟨hal-01771570⟩
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Gabor Arpad Czirjak, Péter László Pap, Csongor István Vágási, Mathieu Giraudeau, Cosmin Mureşan, et al.. Preen gland removal increases plumage bacterial load but not that of feather-degrading bacteria. The Science of Nature Naturwissenschaften, 2013, 100 (2), pp.145-151. ⟨10.1007/s00114-012-1005-2⟩. ⟨hal-02064980⟩
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Alexander Ereskovsky, Emmanuelle Renard, Carole Borchiellini. Cellular and molecular processes leading to embryo formation in sponges: evidences for high conservation of processes throughout animal evolution. Development Genes and Evolution, 2013, 223, pp.5 - 22. ⟨10.1007/s00427-012-0399-3⟩. ⟨hal-01456624⟩
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Eve Gazave, Dennis V Lavrov, Jory Cabrol, Emmanuelle Renard, Caroline Rocher, et al.. Systematics and Molecular Phylogeny of the Family Oscarellidae (Homoscleromorpha) with Description of Two New Oscarella Species. PLoS ONE, 2013, 160, pp.781 - 781. ⟨10.1371/journal.pone.0063976.s006⟩. ⟨hal-01456636⟩
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K. Gerard, E. Guilloton, S. Arnaud-Haond, D. Aurelle, R. Bastrop, et al.. PCR survey of 50 introns in animals: Cross-amplification of homologous EPIC loci in eight non-bilaterian, protostome and deuterostome phyla. Marine Genomics, 2013, 12, pp.1-8. ⟨10.1016/j.margen.2013.10.001⟩. ⟨hal-00960755⟩
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Rémi Grenier, Caroline Costedoat, Rémi Chappaz, Vincent Dubut. Two multiplexed sets of 21 and 18 microsatellites for Phoxinus phoxinus (L.) and Gobio gobio (L.) developed by cross-species amplification. European Journal of Wildlife Research, 2013, 59 (2), pp.291-297. ⟨10.1007/s10344-013-0693-z⟩. ⟨hal-01933451⟩
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Luisa Laureti, Marjorie Selva, Julien Dairou, Ivan Matic. Reduction of dNTP levels enhances DNA replication fidelity in vivo. DNA Repair, 2013, 12 (4), pp.300-305. ⟨10.1016/j.dnarep.2013.01.009⟩. ⟨hal-03054336⟩
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Guillaume Lecointre, Nadia Améziane, Marie-Catherine Boisselier, Céline P Bonillo, Frederic Busson, et al.. Is the Species Flock Concept Operational? The Antarctic Shelf Case. PLoS ONE, 2013, 8 (8), pp.e68787. ⟨10.1371/journal.pone.0068787⟩. ⟨mnhn-02921889⟩
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Jean-Baptiste Ledoux, D. Aurelle, Jean-Pierre Féral, Joaquim Garrabou. Molecular forensics in the precious Mediterranean red coral, Corallium rubrum: testing DNA extraction and microsatellite genotyping using dried colonies. Conservation Genetics Resources, 2013, 5 (2), pp.327-330. ⟨10.1007/s12686-012-9795-2⟩. ⟨hal-01790620⟩
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Jérémy Migliore, Alex Baumel, Marianick Juin, Bruno Fady, Anne Roig, et al.. Surviving in Mountain Climate Refugia: New Insights from the Genetic Diversity and Structure of the Relict Shrub Myrtus nivellei (Myrtaceae) in the Sahara Desert. PLoS ONE, 2013, 8 (9), pp.e73795. ⟨10.1371/journal.pone.0073795⟩. ⟨hal-01771578⟩
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Kenza Mokhtar-Jamaï, Rafel Coma, Jinliang Wang, Frederic Zuberer, Jean-Pierre Féral, et al.. Role of evolutionary and ecological factors in the reproductive success and the spatial genetic structure of the temperate gorgonian Paramuricea clavata. Ecology and Evolution, 2013, 3 (6), pp.1765-1779. ⟨10.1002/ece3.588⟩. ⟨hal-01790568⟩
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ref_biblio
Gwilherm Penant, D. Aurelle, Jean-Pierre Feral, Anne Chenuil. Planktonic larvae do not ensure gene flow in the edible sea urchin Paracentrotus lividus. Marine Ecology Progress Series, 2013, 480, pp.155-170. ⟨10.3354/meps10194⟩. ⟨hal-01631351⟩
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Marine Pouget, Sami Youssef, Jérémy Migliore, Marianick Juin, Frédéric Médail, et al.. Phylogeography sheds light on the central–marginal hypothesis in a Mediterranean narrow endemic plant. Annals of Botany, 2013, 112 (7), pp.1409-1420. ⟨10.1093/aob/mct183⟩. ⟨hal-03616925⟩
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I. Rombouts, G. Beaugrand, X. Fizzala, F. Gaill, S.P.R. Greenstreet, et al.. Food web indicators under the Marine Strategy Framework Directive: From complexity to simplicity?. Ecological Indicators, 2013, 29, pp.246--254. ⟨10.1016/j.ecolind.2012.12.021⟩. ⟨hal-02454846⟩
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Isabelle Rombouts, Gregory Beaugrand, X. Fizzala, F. Gaill, S. P. R. Greenstreed, et al.. Food web indicators under the Marine Strategy Framework Directive : From complexity to simplicity ?. Ecological Indicators, 2013, 29, pp.246-254. ⟨hal-00864309⟩
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W. van den Daele, C. Malaquin, N. Baumel, O. Kononchuk, S. Cristoloveanu. Adaptation of the pseudo-metal-oxide-semiconductor field effect transistor technique to ultrathin silicon-on-insulator wafers characterization: Improved set-up, measurement procedure, parameter extraction, and modeling. Journ. Appl. Phys., 2013, 114 (16), pp.164502:1-9. ⟨10.1063/1.4826631⟩. ⟨hal-01017535⟩
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Alexandra Anh-Thu Weber, Sam Dupont, Anne Chenuil. Thermotolerance and regeneration in the brittle star species complex Ophioderma longicauda: A preliminary study comparing lineages and Mediterranean basins. Comptes Rendus Biologies, 2013, 336 (11-12), pp.572-581. ⟨10.1016/j.crvi.2013.10.004⟩. ⟨hal-01631352⟩
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Conference papers

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Malika Ainouche, Houda Chelaifa, Julie Ferreira de Carvalho, Julien Boutte, Sidonie Bellot, et al.. Polyploidy speciation and genome evolution: Lessons from recent allopolyploids. XVIIth Evolutionary Biology Meeting, Sep 2013, Marseille, France. ⟨hal-01108428⟩
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Book sections

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Jean-Pierre Feral, Romain David. Zones côtières et développement durable : une équation à résoudre . A. Euzen, L. Eymard, F. Gaill. Le devéloppement durable à découvert, Le devéloppement durable à découvert (Chapter: 2-22), CNRS editions, pp.96-97, 2013, 978-2-271-07896-4. ⟨hal-01620564⟩
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Habilitation à diriger des recherches

ref_biblio
Alex Baumel. Situation des structures de diversité génétique dans l'enquête écologique. Biodiversité et Ecologie. Aix-Marseille Université, 2013. ⟨tel-00819332⟩
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Poster communications

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Hervé Macarie, Yoan Labrousse, Maria Isabel Sastre-Conde, Sébastien Bristeau, Christophe Mouvet. Further evidence of biodegradability of the POP chlordecone under methanogenic conditions. Lema J.M. (ed.), Fdez-Polanco F. (ed.), Carballa M. (ed.), Rodriguez J. (ed.), Suarez S. (ed.). 13th World Congress on Anaerobic Digestion, Jun 2013, Saint Jacques de Compostelle, Spain. IWA Anaerobic Digestion Specialist Group, 3 p./ISBN 978-84-695-7756-1, 2013, Proceedings of 13th world congress on anaerobic digestion : Recovering (bio)resources for the world [CD ROM ]. ⟨hal-01648258⟩
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2012

Journal articles

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Josselin Cornuault, Anaïs Bataillard, Ben Warren, Amélie Lootvoet, Pascal Mirleau, et al.. The role of immigration and in-situ radiation in explaining blood parasite assemblages in an island bird clade. Molecular Ecology, 2012, 21 (6), pp.1438-1452. ⟨10.1111/j.1365-294X.2012.05483.x⟩. ⟨hal-02064984⟩
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Vincent Dubut, Antoine Fouquet, Adrien Voisin, Caroline Costedoat, Rémi Chappaz, et al.. From Late Miocene to Holocene: Processes of Differentiation within the Telestes Genus (Actinopterygii: Cyprinidae). PLoS ONE, 2012, 7 (3), ⟨10.1371/journal.pone.0034423⟩. ⟨hal-01771544⟩
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Chiheb Fassatoui, Anne Chenuil, Mohamed Salah Romdhane. Relationships between heterozygosity, growth parameters and age in the common pandora Pagellus erythrinus (Sparidae) in the Gabes Gulf (Tunisia). Marine Ecology Progress Series, 2012, 445, pp.251-261. ⟨10.3354/meps09531⟩. ⟨hal-01631354⟩
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Jean-Pierre Feral. Fine-scale spatial genetic structure in the brooding sea urchin Abatus cordatus suggests vulnerability of the Southern Ocean marine invertebrates facing global change. Polar Biology, 2012, 35 (4), pp.611-623. ⟨10.1007/s00300-011-1106-y⟩. ⟨hal-00824476⟩
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Antoine Fouquet, Jean-Baptiste Ledoux, Vincent Dubut, Brice P. Noonan, Ivan Scotti. The interplay of dispersal limitation, rivers, and historical events shapes the genetic structure of an Amazonian frog. Biological Journal of the Linnean Society, 2012, 106 (2), pp.356 - 373. ⟨10.1111/j.1095-8312.2012.01871.x⟩. ⟨hal-01032422⟩
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Eve Gazave, Pascal Lapébie, Alexander Ereskovsky, Jean V Vacelet, Emmanuelle Renard, et al.. No longer Demospongiae: Homoscleromorph formal nimination as a fourth class of porifera. Hydrobiologia, 2012, 687 (1), pp.3 - 10. ⟨10.1007/s10750-011-0842-x⟩. ⟨hal-01456632⟩
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A. Kharrat-Souissi, Alex Baumel, F. Torre, M. Chaieb. Genetic differentiation of the dominant perennial grass Cenchrus ciliaris L. contributes to response to water deficit in arid lands. Rangeland Journal, 2012, 34 (1), pp.55-62. ⟨10.1071/rj11034⟩. ⟨hal-01451808⟩
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Katarzyna Tarnowska, A. Verney, Maciej Wolowicz, Jean-Pierre Féral, Anne Chenuil. Survival of male and female Cerastoderma glaucum (Bivalvia) during aerial exposure. Vie et Milieu / Life & Environment, 2012, 62 (1), pp.23-28. ⟨hal-00847189⟩
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Katarzyna Tarnowska, Manuela Krakau, Sabine Jacobsen, Maciej Wołowicz, Jean-Pierre Féral, et al.. Comparative phylogeography of two sister (congeneric) species of cardiid bivalve: Strong influence of habitat, life history and post-glacial history. Estuarine, Coastal and Shelf Science, 2012, 107, pp.150-158. ⟨10.1016/j.ecss.2012.05.007⟩. ⟨hal-00847188⟩
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2011

Journal articles

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D. Aurelle, Jean-Baptiste Ledoux, Caroline Rocher, Philippe Borsa, A. Chenuil, et al.. Phylogeography of the red coral (Corallium rubrum): inferences on the evolutionary history of a temperate gorgonian. Genetica, 2011, 139 (7), pp.855 - 869. ⟨10.1007/s10709-011-9589-6⟩. ⟨hal-01790624⟩
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Agnès Dettaï, Sarah J. Adamowizc, Louise Allcock, Claudia P. Arango, David K.A. Barnes, et al.. DNA barcoding and molecular systematics of the benthic and demersal organisms of the CEAMARC survey.. Polar Science, 2011, 38 (8), pp.298-312. ⟨10.1016/j.polar.2011.02.002⟩. ⟨hal-00614982⟩
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Angie Díaz, Jean-Pierre Féral, Bruno David, Thomas Saucède, Elie Poulin. Evolutionary pathways among shallow and deep-sea echinoids of the genus Sterechinus in the Southern Ocean.. Deep Sea Research Part II: Topical Studies in Oceanography, 2011, 58 (1-2), pp.205-211. ⟨10.1016/j.dsr2.2010.10.012⟩. ⟨hal-00567501⟩
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Annick Dubois, Arnaud A. Remay, Olivier Raymond, Sandrine Balzergue, Aurélie Chauvet, et al.. Genomic approach to study floral development genes in Rosa sp.. PLoS ONE, 2011, 6 (12), ⟨10.1371/journal.pone.0028455⟩. ⟨hal-00753396⟩
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Emilie Egea, Bastien Merigot, Chantal Mahe-Bezac, Jean-Pierre Féral, Anne Chenuil. Differential reproductive timing in Echinocardium spp.: The first Mediterranean survey allows interoceanic and interspecific comparisons. Comptes Rendus Biologies, 2011, 334 (1), pp.13-23. ⟨10.1016/j.crvi.2010.10.007⟩. ⟨hal-01631355⟩
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A. Kharrat-Souissi, Alex Baumel, K. Mseddi, F. Torre, M. Chaieb. Polymorphism of Cenchrus ciliaris L. a perennial grass of arid zones. African Journal of Ecology, 2011, 49 (2), pp.209-220. ⟨10.1111/j.1365-2028.2010.01247.x⟩. ⟨hal-01451811⟩
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A. Kharrat-Souissi, Alex Baumel, F. Torre, M. Juin, S. Siljak-Yakovlev, et al.. New insights into the polyploid complex Cenchrus ciliaris L. (Poaceae) show its capacity for gene flow and recombination processes despite its apomictic nature. Australian Journal of Botany, 2011, 59 (6), pp.543-553. ⟨10.1071/BT10312⟩. ⟨hal-01451810⟩
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Pascal Lapébie, Carole Borchiellini, Evelyn Houliston. Dissecting the PCP pathway: One or more pathways?. BioEssays, 2011, 33 (10), pp.759-768. ⟨10.1002/bies.201100023⟩. ⟨hal-02115418⟩
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K. Mokhtar-Jamai, M. Pascual, Ledoux J.-B., R. Coma, Jean-Pierre Féral, et al.. From global to local genetic structuring in the red gorgonian Paramuricea clavata: the interplay between oceanographic conditions and limited larval dispersal. Molecular Ecology, 2011, 20, pp.3291-3305. ⟨10.1111/j.1365-294X.2011.05176.x⟩. ⟨hal-00847206⟩
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Yvan Perez. A Holistic Approach to Marine Eco-Systems Biology. PLoS Biology, 2011. ⟨hal-04459805⟩
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Melthide Sinama, Vincent Dubut, Caroline Costedoat, André Gilles, M. Junker, et al.. Challenges of microsatellite development in Lepidoptera: Euphydryas aurinia (Nymphalidae) as a case study. European Journal of Entomology, 2011, 108 (108), pp.261-266. ⟨hal-01294296⟩
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Sami Youssef, Alex Baumel, Errol Véla, Marianick Juin, Estelle Dumas, et al.. Factors Underlying the Narrow Distribution of the Mediterranean Annual Plant Arenaria provincialis (Caryophyllaceae). Folia Geobotanica, 2011, 46 (4), pp.327 - 350. ⟨10.1007/s12224-011-9101-1⟩. ⟨hal-01791891⟩
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Conference papers

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Yasmina Hamouche, Alex Baumel, Nabila Amirouche, Marie-Thérèse Misset, Rachid Amirouche. Cytotaxonomie et phylogénie des genres Hyacinthoides, Prospero et Barnardia (Hyacinthaceae, Asparagales) d’Algérie. Colloque « Biodiversité, Histoire des Espèces, Evolution des Génomes », Jun 2011, Rennes, France. ⟨hal-01109529⟩
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Herve Macarie, Damien A Devault, Isabel Sastre, Luc Rangon, Alain Soler, et al.. La chlordécone est elle biodégradable et biodisponible? Quelques considérations issues de la littérature et résultats expérimentaux préliminaires. XXXXIème congrès du Groupe Français des Pesticides, May 2011, Orléans, France. ⟨ird-02949747⟩
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Book sections

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Jean-Pierre Feral. La vie sur Terre. C. Jeandel & R. Mosseri. Le climat à découvert, Outils et méthodes en recherche climatique, CNRS Editions, pp.37-39, 2011, 978-2-271-07198-9. ⟨hal-01790646⟩
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Jean-Pierre Feral, Thierry Tatoni. Érosion de la biodiversité. C. Jeandel & R. Mosseri. Le climat à découvert, Outils et méthodes en recherche climatique, CNRS éditions, pp.110-112, 2011, 978-2-271-07198-9. ⟨hal-01790651⟩
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Reports

ref_biblio
Alex Baumel. Écologie de la Sabline de Provence, Arenaria provincialis, synthèse des connaissances pour sa conservation. [Rapport de recherche] Aix Marseille Université (AMU); IMBE Institut Méditerranéen de Biodiversité et d'Ecologie marine et continentale. 2011. ⟨hal-03616897⟩
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2010

Journal articles

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Médéric Diard, Louis Garry, Thomas Mosser, Erick Denamur, Ivan Matic, et al.. Pathogenicity-Associated Islands in Extraintestinal Pathogenic Escherichia coli Are Fitness Elements Involved in Intestinal Colonization. Journal of Bacteriology, 2010, 192 (19), pp.4885-4893. ⟨10.1128/JB.00804-10⟩. ⟨hal-03188683⟩
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Vincent Dubut, Rémi Grenier, Emese Meglécz, Rémi Chappaz, Caroline Costedoat, et al.. Development of 55 novel polymorphic microsatellite loci for the critically endangered L. (Actinopterygii: Perciformes: Percidae) and cross-species amplification in five other percids. European Journal of Wildlife Research, 2010, 56 (6), pp.931-938. ⟨10.1007/s10344-010-0421-x⟩. ⟨hal-00609749⟩
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Vincent Dubut, Melthide Sinama, Jean-François Martin, Emese Meglecz, Juliette Fernandez, et al.. Cross-species amplification of 41 microsatellites in European cyprinids: A tool for evolutionary, population genetics and hybridization studies. BMC Research Notes, 2010, 3. ⟨hal-01933480⟩
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Eve Gazave, Sophie Carteron, Anne Chenuil, Evelyn Richelle-Maurer, Nicole Boury-Esnault, et al.. Polyphyly of the genus Axinella and of the family Axinellidae (Porifera: Demospongiae(p)). Molecular Phylogenetics and Evolution, 2010, 57 (1), pp.35-47. ⟨10.1016/j.ympev.2010.05.028⟩. ⟨hal-01631356⟩
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J.-B. Ledoux, K. Mokhtar-Jamai, C. Roby, Jean-Pierre Feral, J. Garrabou, et al.. Genetic survey of shallow populations of the Mediterranean red coral [ Corallium rubrum (Linnaeus, 1758)]: new insights into evolutionary processes shaping nuclear diversity and implications for conservation. Molecular Ecology, 2010, 19 (4), pp.675-690. ⟨10.1111/j.1365-294x.2009.04516.x⟩. ⟨hal-02050215⟩
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Emese Meglécz, Caroline Costedoat, Vincent Dubut, André Gilles, Thibaut Malausa, et al.. QDD: a user-friendly program to select microsatellite markers and design primers from large sequencing projects. Bioinformatics, 2010, 26 (3), pp.403-404. ⟨10.1093/bioinformatics/btp670⟩. ⟨hal-02667917⟩
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Conference papers

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Jean-Pierre Feral, Elie Poulin. Kerguelen Islands: a living laboratory to understand the benthic biodiversity of the Antarctic. 1st International Scientific Symposium on the Kerguelen Plateau, Apr 2010, Concarneau, France. ⟨hal-01790635⟩
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Book sections

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Gazave Eve, Emmanuelle Renard. Evolution of Notch Transmembrane Receptors. Encyclopedia of life sciences, John Wiley & Sons Ltd, 2010, 9780470015902. ⟨10.1002/9780470015902.a0022893⟩. ⟨hal-01793157⟩
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Poster communications

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Alex Baumel, Sami Youssef, Errol Véla, Marianick Juin, Estelle Dumas, et al.. Factors driving endemism of an annual Mediterranean plant species. 14th Evolutionary Biology Meeting at Marseille, Sep 2010, Marseille, France. ⟨hal-04533897⟩
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M. Vennetier, L. Cecillon, René Guénon, A. Schaffhauser, A. Vergnoux, et al.. Repeated droughts and fires mutually increase their impact on forest ecosystems. XXIII IUFRO world congress, Aug 2010, Seoul, South Korea. pp.57-58, 2010. ⟨hal-02593447⟩
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2009

Journal articles

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Alex Baumel, Laurence Affre, E. Vela, P. Auda, F. Torre, et al.. Ecological magnitude and fine scale dynamics of the mediterranean narrow endemic therophyte, Arenaria provincialis (Caryophyllaceae). Acta Botanica Gallica, 2009, 156 (2), pp.259-272. ⟨10.1080/12538078.2009.10516156⟩. ⟨hal-01451814⟩
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Alex Baumel, P. Auda, F. Torre, F. Médail. Morphological polymorphism and rDNA internal transcribed spacer (ITS) sequence variation in Armeria (Plumbaginaceae) from south-eastern France. Botanical Journal of the Linnean Society, 2009, 159 (2), pp.255-267. ⟨10.1111/j.1095-8339.2008.00925.x⟩. ⟨hal-01451813⟩
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Marie-Cécile Caillaud, Laetitia Paganelli, Philippe Lecomte, Laurent Deslandes, Michael Quentin, et al.. Spindle assembly checkpoint protein dynamics reveal conserved and unsuspected roles in plant cell division. PLoS ONE, 2009, 4 (8), pp.e6757. ⟨10.1371/journal.pone.0006757⟩. ⟨hal-02662359⟩
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P. Campagne, L. Affre, A. Baumel, P. Roche, Thierry Tatoni. Fine-scale response to landscape structure in Primula vulgaris Huds.: does hedgerow network connectedness ensure connectivity through gene flow?. Population Ecology, 2009, 51, pp.209-219. ⟨hal-02593315⟩
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Laurent Crespel, Manuel Le Bris, A. Pernet, S. Gudin, L. Hibrand Saint Oyant. Application of ISSRs for cultivar identification and assessment of genetic relationships in rose. Plant Breeding, 2009, 128 (5), pp.501-506. ⟨10.1111/j.1439-0523.2008.01600.x⟩. ⟨hal-00729951⟩
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Vincent Dubut, François Cartault, Christine Payet, Marie-Dominique Thionville, Pascal Murail. Complete Mitochondrial Sequences for Haplogroups M23 and M46: Insights into the Asian Ancestry of the Malagasy Population. Human Biology, 2009, 81 (4), pp.495-500. ⟨halshs-00449196⟩
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Vincent Dubut, Pascal Murail, Nicolas Pech, Marie-Dominique Thionville, François Cartault. Inter- and Extra-Indian Admixture and Genetic Diversity in Reunion Island Revealed by Analysis of Mitochondrial DNA. Annals of Human Genetics, 2009, 73, pp.314-334. ⟨halshs-00433392⟩
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Vincent Dubut, François Cartault, André Gilles, Marie-Dominique Thionville, Pascal Murail. Genetic data analysis of 10 Y-STR loci in two ethnic groups of Asian ancestry (Gujarat and Guangdong-Fujian provinces) from Reunion Island (Indian Ocean).. Legal Medicine, 2009, 11, pp.104-106. ⟨halshs-00433396⟩
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Alexander Ereskovsky, Carole Borchiellini, Eve Gazave, Julijana Ivanisevic, Pascal Lapébie, et al.. The Homoscleromorph sponge Oscarella lobularis , a promising sponge model in evolutionary and developmental biology. BioEssays, 2009, 31 (1), pp.89 - 97. ⟨10.1002/bies.080058⟩. ⟨hal-01793128⟩
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Antoine Fouquet, Vincent Dubut, Robert Hataway, Caroline Scotti-Saintagne, Ivan Scotti, et al.. Isolation and characterisation of 19 microsatellite loci from the Amazonian frog Adenomera andreae (Amplibia: anura: Leptodactylidae). Conservation Genetics Resources, 2009, 1 (1), pp.217-220. ⟨10.1007/s12686-009-9053-4⟩. ⟨hal-01032133⟩
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Pascal Lapébie, Eve Gazave, Alexander Ereskovsky, Romain Derelle, Chantal Bézac, et al.. WNT/β-Catenin Signalling and Epithelial Patterning in the Homoscleromorph Sponge Oscarella. PLoS ONE, 2009, 4 (6), ⟨10.1371/journal.pone.0005823⟩. ⟨hal-01793109⟩
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Adèle Mennerat, Pascal Mirleau, Jacques Blondel, Philippe Perret, Marcel Lambrechts, et al.. Aromatic plants in nests of the blue tit Cyanistes caeruleus protect chicks from bacteria. Oecologia, 2009, 161 (4), pp.849-855. ⟨10.1007/s00442-009-1418-6⟩. ⟨hal-02065038⟩
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Herve Philippe, Romain Derelle, P. Lopez, K. Pick, Carole Borchiellini, et al.. Phylogenomics revives traditional views on deep animal relationships.. Current Biology - CB, 2009, 19 (8), pp.706-712. ⟨10.1016/j.cub.2009.02.052⟩. ⟨hal-00594690⟩
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Emmanuelle Renard, Jean Vacelet, Eve Gazave, Pascal Lapébie, Carole Borchiellini, et al.. Origin of the neuro-sensory system: new and expected insights from sponges. Integrative Zoology, 2009, 4 (3), pp.294 - 308. ⟨10.1111/j.1749-4877.2009.00167.x⟩. ⟨hal-01793101⟩
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Sabine Stohr, Emilie Boissin, Anne Chenuil. Potential cryptic speciation in Mediterranean populations of Ophioderma (Echinodermata: Ophiuroidea). Zootaxa, 2009, 2071, pp.1-20. ⟨hal-01631358⟩
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Katarzyna Tarnowska, Maciej Wolowicz, Anne Chenuil, Jean-Pierre Féral. Comparative studies on the morphometry and physiology of European populations of the lagoon specialist Cerastoderma glaucum (Bivalvia). Oceanologia, 2009, 51 (3), pp.437-458. ⟨10.5697/oc.51-3.437⟩. ⟨hal-01631357⟩
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Book sections

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Xavier Latour, Sandrine Delorme, Pascal Mirleau, Philippe P. Lemanceau. Identification of Traits Implicated in the Rhizosphere Competence of Fluorescent Pseudomonads: Description of a Strategy Based on Population and Model Strain Studies. Sustainable Agriculture, Springer Netherlands, pp.285-296, 2009, 978-90-481-2665-1. ⟨10.1007/978-90-481-2666-8_19⟩. ⟨hal-02065058⟩
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Other publications

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Christiane Weber, Jean-Jacques Delannoy, Françoise Gourmelon, Marc Robin, Jean-Pierre Féral, et al.. Etudes de nouveaux biomes. 2009, pp.31-40. ⟨hal-00443732⟩
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2008

Journal articles

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P. Campagne, Edith Buisson, G. Varouchas, P. Roche, A. Baumel, et al.. Modeling landscape structure constraints on species dispersal with a cellular automaton: Are there convergences with empirical data?. Ecological Complexity, 2008, 6 (2), pp.183-190. ⟨10.1016/j.ecocom.2008.10.010⟩. ⟨hal-02591830⟩
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Anne Chenuil, Emilie Egea, Caroline Rocher, Hélène Touzet, Jean-Pierre Féral. Does hybridization increase evolutionary rate? Data from the 28S-rDNA D8 domain in echinoderms.. Journal of Molecular Evolution, 2008, 67 (5), pp.539-50. ⟨10.1007/s00239-008-9171-8⟩. ⟨hal-00824034⟩
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Laurent Crespel, S. Gudin. Bilateral rooting and flower production in Rosa hybrida cuttings. Journal of Horticultural Science and Biotechnology, 2008, 83 (4), pp.474-476. ⟨hal-00729842⟩
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K. Gérard, C. Roby, N. Chevalier, B. Thomassin, A. Chenuil, et al.. Assessment of three mitochondrial loci variability for the crown-of-thorns starfish: a first insight of Acanthaster phylogeography.. Comptes Rendus Biologies, 2008, 332, pp.137-143. ⟨hal-00260698⟩
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Karin Gérard, Charlotte Roby, Nicolas Chevalier, Bernard Thomassin, Anne Chenuil, et al.. Assessment of three mitochondrial loci variability for the crown-of-thorns starfish: A first insight into Acanthaster phylogeography. Comptes Rendus Biologies, 2008, 331 (2), pp.137-143. ⟨10.1016/j.crvi.2007.11.005⟩. ⟨hal-01631359⟩
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Karin Gérard, Nicolas Bierne, Philippe Borsa, Anne Chenuil, Jean-Pierre Féral. Pleistocene separation of mitochondrial lineages of Mytilus spp. mussels from Northern and Southern Hemispheres and strong genetic differentiation among southern populations. Molecular Phylogenetics and Evolution, 2008, 49 (1), pp.84-91. ⟨10.1016/j.ympev.2008.07.006⟩. ⟨halsde-00475209⟩
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Conference papers

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M. Vennetier, L. Cecillon, René Guénon, A. Schaffhauser, A. Vergnoux, et al.. Repeated fires and droughts threaten functional biodiversity in Mediterranean ecosystems. IUFRO Conference on Biodiversity in Forest Ecosystems and Landscapes, Aug 2008, Kamloops, Canada. pp.1. ⟨hal-02591021⟩
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Reports

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M. Vennetier, L. Cecillon, René Guénon, A. Schaffhauser, A. Vergnoux, et al.. Étude de l'impact d'incendies de forêt répétés sur la biodiversité et sur les sols. Recherche d'indicateurs.. irstea. 2008, pp.32. ⟨hal-02591038⟩
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M. Vennetier, L. Cecillon, René Guénon, A. Schaffhauser, A. Vergnoux, et al.. Étude de l'impact d'incendies de forêt répétés sur la biodiversité et sur les sols. Recherche d'indicateurs. Rapport final détaillé.. irstea. 2008, pp.238. ⟨hal-02591040⟩
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2007

Journal articles

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Roxane M. Barthelemy, Anne Chenuil, Samuel Blanquart, Jean-Paul Casanova, Eric Faure. Translational machinery of the chaetognath Spadella cephaloptera: a transcriptomic approach to the analysis of cytosolic ribosomal protein genes and their expression. BMC Evolutionary Biology, 2007, 7 (1), ⟨10.1186/1471-2148-7-146⟩. ⟨hal-01631361⟩
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Conference papers

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Frédéric Medail, Alex Baumel, Katia Diadema, Bruno Fady, Regine Verlaque. Importance of refugia in shaping Mediterranean plant biodiversity. Diaporama. 12. meeting of the Organization for the Phyto-Taxonomic Investigation of the Mediterranean Area; Optima XII, Sep 2007, Pise, Italy. 39 p. ⟨hal-02815316⟩
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2006

Journal articles

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Anne Chenuil. Choosing the right Molecular Genetic Markers for studying biodiversity: from molecular evolution to practical aspects. Genetica, 2006, 127, pp.101-120. ⟨10.1007/s10709-005-2485-1⟩. ⟨hal-00093762⟩
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Daniel Papillon, Yvan Perez, Xavier Caubit, Yannick Le Parco. Systematics of the Chaetognatha under the light of molecular data, using duplicated 18S ribosomal DNA. Molecular Phylogenetics and Evolution, 2006, 38 (3), pp.621-634. ⟨10.1016/j.ympev.2005.12.004⟩. ⟨hal-00093729⟩
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Poster communications

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P. Chevaldonne, C. Lejeusne, Y. Pillon, C. Dehollain, C. Lecroisey, et al.. Molecular phylogeography of Mediterranean and Eastern Atlantic sponges of the genus Aplysina.. Custodio, M.R. et al. (Eds.). 7th International Sponge Symposium, 2006, Buzios, Brazil. pp.273, 2006. ⟨hal-00093794⟩
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2005

Journal articles

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Daniel Papillon, Yvan Perez, Laurent Fasano, Yannick Le Parco, Xavier Caubit. Restricted expression of a median Hox gene in the central nervous system of chaetognaths. Development Genes and Evolution, 2005, 215 (7), pp.396-373. ⟨10.1007/s00427-005-0483-z⟩. ⟨hal-00093476⟩
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2004

Journal articles

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A. Chenuil, Laurent Crespin, L. Pouyaud, Patrick Berrebi. Autosomal differences between males and females in hybrid zones: a first report from Barbus barbus and Barbus meridionalis (Cyprinidae). Heredity, 2004, 93 (2), pp.128-134. ⟨10.1038/sj.hdy.6800455⟩. ⟨halsde-00330373⟩
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Vincent Dubut, Lionel Chollet, Pascal Murail, François Cartault, Eliane Béraud-Colomb, et al.. mtDNA polymorphisms in five French groups: importance of regional sampling. European Journal of Human Genetics, 2004, 12, pp.293-300. ⟨halshs-00433402⟩
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Xavier Veaute, Stéphane Delmas, Marjorie Selva, Josette Jeusset, Eric Le Cam, et al.. UvrD helicase, unlike Rep helicase, dismantles RecA nucleoprotein filaments in Escherichia coli. EMBO Journal, 2004, 24 (1), pp.180-189. ⟨10.1038/sj.emboj.7600485⟩. ⟨hal-03065307⟩
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Conference papers

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Vincent Dubut, Thierry Malbert, François Cartault, Pascal Murail. Methodology and geneticist's responsibility facing sociological aspects and specificities of a multiethnic society: The case of Reunion Island (Indian Ocean). EAA 14th International Congress, Human Variability: A Bridge Between Sciences & Humanities, Sep 2004, Komotini, Greece. ⟨hal-01960572⟩
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2003

Journal articles

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M. Manuel, Carole Borchiellini, E. Alivon, Jean Vacelet, Y. Le Parco, et al.. Phylogeny and evolution of calcareous sponges: monophyly of calcinea and calcaronea, high level of morphological homoplasy, and the primitive nature of axial symmetry. Systematic biology., 2003, 52, pp.311-333. ⟨hal-00135326⟩
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2002

Journal articles

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Antje Kahnert, Pascal Mirleau, Robin Wait, Michael Kertesz. The LysR-type regulator SftR is involved in soil survival and sulphate ester metabolism in Pseudomonas putida. Environmental Microbiology, 2002, 4 (4), pp.225-237. ⟨10.1046/j.1462-2920.2002.00289.x⟩. ⟨hal-02065074⟩
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2001

Journal articles

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N. Mogentale-Profizi, L. Chollet, A. Stevanovitch, V. Dubut, C. Poggi, et al.. Mitochondrial DNA sequence diversity in two groups of Italian Veneto speakers from Veneto. Annals of Human Genetics, 2001, 65 (2), pp.153 - 166. ⟨10.1046/j.1469-1809.2001.6520153.x⟩. ⟨hal-01933423⟩
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