Publications HAL

2022

Journal articles

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Thomas Brazier, Sylvain Glémin. Diversity and determinants of recombination landscapes in flowering plants. PLoS Genetics, Public Library of Science, 2022, 18 (8), pp.e1010141. ⟨10.1371/journal.pgen.1010141⟩. ⟨hal-03776232⟩
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Marion Orsucci, Xuyue Yang, Theofilos Vanikiotis, Maria Guerrina, Tianlin Duan, et al.. Competitive ability depends on mating system and ploidy level across Capsella species. Annals of Botany, Oxford University Press (OUP), 2022, 129 (6), pp.697-708. ⟨10.1093/aob/mcac044⟩. ⟨hal-03631267⟩
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Bogi Trickovic, Sylvain Glémin. Establishment of local adaptation in partly self-fertilizing populations. Genetics, Genetics Society of America, 2022, 220 (2), ⟨10.1093/genetics/iyab201⟩. ⟨hal-03467503⟩
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Jun Chen, Thomas Bataillon, Sylvain Glémin, Martin Lascoux. What does the Distribution of Fitness Effects of new mutations (DFE) reflect? Insights from plants. New Phytologist, Wiley, 2022, 233 (4), pp.1613-1619. ⟨10.1111/nph.17826⟩. ⟨hal-03414519⟩
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J Chen, T Bataillon, Sylvain Glémin, M Lascoux. Hunting for beneficial mutations: conditioning on SIFT scores when estimating the distribution of fitness effect of new mutations. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2022, 14 (1), ⟨10.1093/gbe/evab151⟩. ⟨hal-03281831⟩
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Amandine Cornille, Mathieu Tiret, Adriana Salcedo, Huirun R. Huang, Marion Orsucci, et al.. The relative role of plasticity and demographic history in Capsella bursa-pastoris: a common garden experiment in Asia and Europe. AoB Plants, Oxford University Press 2022, 14 (3), plac011. ⟨10.1093/aobpla/plac011⟩. ⟨hal-03714332⟩
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2021

Journal articles

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Aline Muyle, Hélène Martin, Niklaus Zemp, Maeva Mollion, Sophie Gallina, et al.. Dioecy is associated with high genetic diversity and adaptation rates in the plant genus Silene. Molecular Biology and Evolution, Oxford University Press (OUP), 2021, 38 (3), pp.805-818. ⟨10.1093/molbev/msaa229⟩. ⟨hal-02959763⟩
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Sylvain Glémin. Balancing selection in self-fertilizing populations. Evolution - International Journal of Organic Evolution, Wiley, 2021, 75 (5), pp.1011-1029. ⟨10.1111/evo.14194⟩. ⟨hal-03192004⟩
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Ingemar Kaj, Sylvain Glémin, Daniah Tahir, Martin Lascoux. Analysis of diversity-dependent species evolution using concepts in population genetics. Journal of Mathematical Biology, Springer Verlag (Germany), 2021, 82 (4), pp.22. ⟨10.1007/s00285-021-01559-5⟩. ⟨hal-03157283⟩
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Alheli Flores-Ferrer, Anne Nguyen, Sylvain Glémin, Jean-Marc Deragon, Olivier Panaud, et al.. The Ecology of the Genome and the Dynamics of the Biological Dark Matter. Journal of Theoretical Biology, Elsevier, 2021, 518, pp.110641. ⟨10.1016/j.jtbi.2021.110641⟩. ⟨hal-03157289⟩
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Concetta Burgarella, Angélique Berger, Sylvain Glémin, Jacques David, Nancy Terrier, et al.. The Road to Sorghum Domestication: Evidence From Nucleotide Diversity and Gene Expression Patterns. Frontiers in Plant Science, Frontiers, 2021, 12, ⟨10.3389/fpls.2021.666075⟩. ⟨hal-03368949v2⟩
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Andrew J. Helmstetter, Sylvain Glémin, Jos Käfer, Rosana Zenil-Ferguson, Hervé Sauquet, et al.. Pulled Diversification Rates, Lineages-Through-Time Plots, and Modern Macroevolutionary Modeling. Systematic Biology, Oxford University Press (OUP), 2021, ⟨10.1093/sysbio/syab083⟩. ⟨hal-03629564⟩
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2020

Journal articles

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Xiaodong Liu, Sylvain Glémin, Sophie Karrenberg. Evolution of putative barrier loci at an intermediate stage of speciation with gene flow in campions (Silene). Molecular Ecology, Wiley, 2020, 29 (18), pp.3511-3525. ⟨10.1111/mec.15571⟩. ⟨hal-02927252⟩
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Marion Orsucci, Pascal Milesi, Johanna Hansen, Johanna Girodolle, Sylvain Glémin, et al.. Shift in ecological strategy helps marginal populations of shepherd's purse (Capsella bursa-pastoris) to overcome a high genetic load. Proceedings of the Royal Society B: Biological Sciences, Royal Society, The, 2020, 287 (1927), pp.20200463. ⟨10.1098/rspb.2020.0463⟩. ⟨hal-02798477⟩
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Jun Chen, Sylvain Glémin, Martin Lascoux. From Drift to Draft: How Much Do Beneficial Mutations Actually Contribute to Predictions of Ohta's Slightly Deleterious Model of Molecular Evolution?. Genetics, Genetics Society of America, 2020, 214 (4), pp.1005-1018. ⟨10.1534/genetics.119.302869⟩. ⟨hal-02538453⟩
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Preprints, Working Papers, ...

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A. Cornille, M. Tiret, A. Salcedo, H.R. Huang, M. Orsucci, et al.. Phenotypic plasticity, population structure and adaptation in a young weed species with a worldwide distribution. 2020. ⟨hal-03081389⟩
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2019

Journal articles

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M Gros-Balthazard, G Besnard, G Sarah, Y Holtz, J Leclercq, et al.. Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication. Plant Journal, Wiley, 2019, 100 (1), pp.143-157. ⟨10.1111/tpj.14435⟩. ⟨hal-02178869⟩
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Muriel Gros‐balthazard, Guillaume Besnard, Gautier Sarah, Yan Holtz, Julie Leclercq, et al.. Evolutionary transcriptomics reveals the origins of olives and the genomic changes associated with their domestication. Plant Journal, Wiley, 2019, 100 (1), pp.143-157. ⟨10.1111/tpj.14435⟩. ⟨hal-02988768⟩
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Sylvain Glémin, Celine Scornavacca, Jacques Dainat, Concetta Burgarella, Veronique Viader, et al.. Pervasive hybridizations in the history of wheat relatives. Science Advances , American Association for the Advancement of Science (AAAS), 2019, 5 (5), pp.eaav9188. ⟨10.1126/sciadv.aav9188⟩. ⟨hal-02144799⟩
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Dmytro Kryvokhyzha, Pascal Milesi, Tianlin Duan, Marion Orsucci, Stephen I Wright, et al.. Towards the new normal Transcriptomic convergence and genomic legacy of the two subgenomes of an allopolyploid weed (Capsella bursa-pastoris). PLoS Genetics, Public Library of Science, 2019, 15 (5), pp.e1008131. ⟨10.1371/journal.pgen.1008131⟩. ⟨hal-02150225⟩
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Pierre-Henri Clergeot, Nicolas O. Rode, Sylvain Glemin, Mikael Brandström-Durling, Katarina Ihrmark, et al.. Estimating the fitness effect of deleterious mutations during the two phases of the life cycle: a new method applied to the root-rot fungus Heterobasidion parviporum. Genetics, Genetics Society of America, 2019, 211 (3), pp.963-976. ⟨10.1534/genetics.118.301855⟩. ⟨hal-02370791⟩
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Dmytro Kryvokhyzha, Adriana Salcedo, Mimmi C. Eriksson, Tianlin Duan, Nilesh Tawari, et al.. Parental legacy, demography, and admixture influenced the evolution of the two subgenomes of the tetraploid Capsella bursa-pastoris (Brassicaceae). PLoS Genetics, Public Library of Science, 2019, 15 (2), pp.e1007949. ⟨10.1371/journal.pgen.1007949⟩. ⟨hal-02369510⟩
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Daniah Tahir, Sylvain Glémin, Martin Lascoux, Ingemar Kaj. Modeling a trait-dependent diversification process coupled with molecular evolution on a random species tree. Journal of Theoretical Biology, Elsevier, 2019, 461, pp.189-203. ⟨10.1016/j.jtbi.2018.10.032⟩. ⟨hal-02370723⟩
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Conference papers

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Sylvain Glémin. Dynamics of selfing evolution and its genomic consequences in Aegilops species (wheat relatives). Journée "Evolution des génomes et traits d’histoire de vie", Oct 2019, Montpellier, France. ⟨hal-02493200⟩
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Sylvain Glémin. Evolutionary forces affecting base composition in coding sequences of plant genomes. Le Petit Pois Déridé, Jun 2019, Orsay, France. ⟨hal-02493087⟩
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Sylvain Glémin. The genomic consequences of mating system evolution (and other life history traits). Winter School: “Molecular evolution patterns and processes”, Feb 2019, Jyväskylä, Finland. ⟨hal-02493077⟩
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Sylvain Glémin. Adaptation and maladaptation in self-fertilizing populations. Workshop “Sex and Reproduction in marine algae”, Jan 2019, Roscoff, France. ⟨hal-02493064⟩
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Book sections

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Sylvain Glémin, Clémentine M. François, Nicolas Galtier. Genome Evolution in Outcrossing vs. Selfing vs. Asexual Species. Evolutionary Genomics - Statistical and Computational Methods Second Edition, 2019, ⟨10.1007/978-1-4939-9074-0_11⟩. ⟨hal-02370678⟩
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2018

Journal articles

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Sandra Petrone Mendoza, Martin Lascoux, Sylvain Glémin. Competitive ability of Capsella species with different mating systems and ploidy levels. Annals of Botany, Oxford University Press (OUP), 2018, 121 (6), pp.1257-1264. ⟨10.1093/aob/mcy014⟩. ⟨hal-03028950⟩
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Nicolas Galtier, Camille Roux, Marjolaine Rousselle, Jonathan Romiguier, Emeric Figuet, et al.. Codon Usage Bias in Animals: Disentangling the Effects of Natural Selection, Effective Population Size, and GC-Biased Gene Conversion. Molecular Biology and Evolution, Oxford University Press (OUP), 2018, 35 (5), pp.1092 - 1103. ⟨10.1093/molbev/msy015⟩. ⟨hal-01806906⟩
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Conference papers

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Sylvain Glémin, Xuyue Yang, Sandra Petrone-Mendoza, Johanna Hansen, Marion Orsucci, et al.. Variation in competitive ability with mating system, ploidy and range expansion in four Capsella species. SFEcologie2018, International Conference on Ecological Sciences, SFEcologie, Oct 2018, Rennes, France. ⟨hal-02439567⟩
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Preprints, Working Papers, ...

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Xuyue Yang, Martin Lascoux, Sylvain Glémin. Variation in competitive ability with mating system, ploidy and range expansion in four Capsella species: Peer-reviewed and recommended by Peer Community in Evolutionary Biology. . 2018. ⟨hal-01852075⟩
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2017

Journal articles

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Paula Tataru, Maéva Mollion, Sylvain Glémin, Thomas Bataillon. Inference of Distribution of Fitness Effects and Proportion of Adaptive Substitutions from Polymorphism Data. Genetics, Genetics Society of America, 2017, 207 (3), pp.1103-1119. ⟨10.1534/genetics.117.300323⟩. ⟨hal-03101332⟩
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Krzysztof Bartoszek, Sylvain Glémin, Ingemar Kaj, Martin Lascoux. Using the Ornstein–Uhlenbeck process to model the evolution of interacting populations. Journal of Theoretical Biology, Elsevier, 2017, 429, pp.35 - 45. ⟨10.1016/j.jtbi.2017.06.011⟩. ⟨hal-03111902⟩
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Matthew Hartfield, Thomas Bataillon, Sylvain Glémin. The Evolutionary Interplay between Adaptation and Self-Fertilization. Trends in Genetics, Elsevier, 2017, 33 (6), pp.420-431. ⟨10.1016/j.tig.2017.04.002⟩. ⟨hal-03081350⟩
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Gautier Sarah, Félix Homa, Stéphanie Pointet, Sandy Contreras, François Sabot, et al.. A large set of 26 new reference transcriptomes dedicated to comparative population genomics in crops and wild relatives. Molecular Ecology Resources, Wiley/Blackwell, 2017, 17 (3), pp.565-580. ⟨10.1111/1755-0998.12587⟩. ⟨hal-01930391⟩
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Elsa Noël, Philippe Jarne, Sylvain Glémin, Alicia Mackenzie, Adeline Segard, et al.. Experimental Evidence for the Negative Effects of Self-Fertilization on the Adaptive Potential of Populations. Current Biology - CB, Elsevier, 2017, 27 (2), pp.237-242. ⟨10.1016/j.cub.2016.11.015⟩. ⟨hal-01456775⟩
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Jun Chen, Sylvain Glémin, Martin Lascoux. Genetic Diversity and the Efficacy of Purifying Selection across Plant and Animal Species. Molecular Biology and Evolution, Oxford University Press (OUP), 2017, 34 (6), pp.1417-1428. ⟨10.1093/molbev/msx088⟩. ⟨hal-03078522⟩
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Christopher Sauvage, Andrea Rau, Charlotte Aichholz, Joel Chadoeuf, Gautier Sarah, et al.. Domestication rewired gene expression and nucleotide diversity patterns in tomato. Plant Journal, Wiley, 2017, 91 (4), pp.631-645. ⟨10.1111/tpj.13592⟩. ⟨hal-01594937⟩
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Yves Clément, Sarah Gallien, Yan Holtz, Félix Homa, Stéphanie Pointet, et al.. Evolutionary forces affecting synonymous variations in plant genomes. PLoS Genetics, Public Library of Science, 2017, 13 (5), pp.e1006799. ⟨10.1371/journal.pgen.1006799⟩. ⟨hal-01608613v2⟩
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2016

Journal articles

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Jacques David, Sylvain Glémin, Gautier Sarah, Benoit Nabholz, Francois Sabot, et al.. La diversité génétique des plantes cultivées à l'heure de l'informatique génétique à haut débit: génomique comparative de la domestication. Sélectionneur Français, 2016, pp.3-13. ⟨hal-01607736⟩
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E. Cherif, S. Zehdi-Azouzi, A. Crabos, K. Castillo, N. Chabrillange, et al.. Evolution of sex chromosomes prior to speciation in the dioecious Phoenix species. Journal of Evolutionary Biology, Wiley, 2016, 29 (8), pp.1513-1522. ⟨10.1111/jeb.12887⟩. ⟨hal-03038938⟩
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Matthew Hartfield, Sylvain Glémin. Limits to Adaptation in Partially Selfing Species. Genetics, Genetics Society of America, 2016, 203 (2), pp.959 - 974. ⟨10.1534/genetics.116.188821⟩. ⟨hal-01929427⟩
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Dmytro Kryvokhyzha, Karl Holm, Jun Chen, Amandine Cornille, Sylvain Glémin, et al.. The influence of population structure on gene expression and flowering time variation in the ubiquitous weed Capsella bursa-pastoris (Brassicaceae). Molecular Ecology, Wiley, 2016, 25 (5), pp.1106-1121. ⟨10.1111/mec.13537⟩. ⟨hal-03054314⟩
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A. Cornille, A. Salcedo, D. Kryvokhyzha, S. Glémin, K. Holm, et al.. Genomic signature of successful colonization of Eurasia by the allopolyploid shepherd's purse ( Capsella bursa-pastoris ). Molecular Ecology, Wiley, 2016, 25 (2), pp.616-629. ⟨10.1111/mec.13491⟩. ⟨hal-03038972⟩
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Conference papers

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Celine Scornavacca, Sylvain Glémin, Jacques Dainat, Concetta Burgarella, Gautier Sarah, et al.. Phylogenomics unravels the complex reticulated history and shifts in mating systems in wheat relatives (Aegilops/Triticum genus). ALPHY 2016: Belgium-French meeting on Bioinformatics and Evolutionary Genomics March 17-18 2016, Institut de Biologie Physico-Chimique (IBPC). Paris, FRA. Muséum National d’Histoire Naturelle (MNHN), FRA., Mar 2016, Lille, France. ⟨hal-02793573⟩
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2015

Journal articles

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Sylvain Glemin, Peter F. Arndt, Messer W. Philip, Petrov M. Dmitri, Nicolas Galtier, et al.. Quantification of GC-biased gene conversion in the human genome. Genome Research, Cold Spring Harbor Laboratory Press, 2015, 25 (8), pp.1215 - 1228. ⟨10.1101/gr.185488.114⟩. ⟨hal-01900676⟩
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Concetta C. Burgarella, Philippe Gayral, Marion Ballenghien, Aurelien Bernard, Patrice David, et al.. Molecular evolution of freshwater snails with contrasting mating systems. Molecular Biology and Evolution, Oxford University Press (OUP), 2015, 32 (9), pp.2403-2416. ⟨10.1093/molbev/msv121⟩. ⟨hal-01315526⟩
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Andreas Wallberg, Sylvain Glémin, Matthew T Webster. Extreme Recombination Frequencies Shape Genome Variation and Evolution in the Honeybee, Apis mellifera. PLoS Genetics, Public Library of Science, 2015, 11, ⟨10.1371/journal.pgen.1005189⟩. ⟨hal-02369486⟩
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Yves Clément, Margaux-Alison Fustier, Benoit Nabholz, Sylvain Glemin. The Bimodal Distribution of Genic GC Content Is Ancestral to Monocot Species. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2015, 7 (1), pp.336-348. ⟨10.1093/gbe/evu278⟩. ⟨hal-01815496⟩
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Thomas Bataillon, Jinjie Duan, Christina Hvilsom, Xin Jin, Yingrui Li, et al.. Inference of Purifying and Positive Selection in Three Subspecies of Chimpanzees (Pan troglodytes) from Exome Sequencing. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2015, 7 (4), pp.1122-1132. ⟨10.1093/gbe/evv058⟩. ⟨hal-02998812⟩
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Adrienne Ressayre, Sylvain Glémin, Pierre P. Montalent, Laurana Serres Giardi, Christine Dillmann, et al.. Introns structure patterns of variation in nucleotide composition in Arabidopsis thaliana and rice protein-coding genes. Genome Biology and Evolution, Society for Molecular Biology and Evolution, 2015, 7 (10), pp.2913-2928. ⟨10.1093/gbe/evv189⟩. ⟨hal-02633755⟩
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Conference papers

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Christopher Sauvage, Charlotte Aichholz, Gautier Sarah, Manuel Ruiz, Mathilde Causse, et al.. Modelling the population history using population genomics : the tomato domestication as a case of study. 12. Solanaceae Conference, Université de Bordeaux (UB). FRA., Oct 2015, Bordeaux, France. ⟨hal-01269378⟩
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2014

Journal articles

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S. Glémin, A Muyle. Mating systems and selection efficacy: a test using chloroplastic sequence data in Angiosperms.. Journal of Evolutionary Biology, Wiley, 2014, 27 (7), pp.1386-99. ⟨10.1111/jeb.12356⟩. ⟨hal-03019482⟩
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Benoit Nabholz, Gautier Sarah, François Sabot, Manuel Ruiz, Hélène Adam, et al.. Transcriptome population genomics reveals severe bottleneck and domestication cost in the African rice ( Oryza glaberrima ). Molecular Ecology, Wiley, 2014, 23 (9), pp.2210 - 2227. ⟨10.1111/mec.12738⟩. ⟨hal-01919691⟩
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Matthew Hartfield, Sylvain Glémin. Hitchhiking of deleterious alleles and the cost of adaptation in partially selfing species.. Genetics, Genetics Society of America, 2014, 196 (1), pp.281-93. ⟨10.1534/genetics.113.158196⟩. ⟨hal-03019702⟩
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Jonathan Romiguier, P Gayral, M Ballenghien, Arnaud Bernard, V Cahais, et al.. Comparative population genomics in animals uncovers the determinants of genetic diversity. Nature, Nature Publishing Group, 2014, 515 (7526), pp.261-263. ⟨10.1038/nature13685⟩. ⟨hal-01313724⟩
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Y Lesecque, S. S. Glemin, N. Lartillot, D. Mouchiroud, L. Duret. The Red Queen Model of Recombination Hotspots Evolution in the Light of Archaic and Modern Human Genomes. PLoS Genetics, Public Library of Science, 2014, 10, pp.e1004790. ⟨10.1371/journal.pgen.1004790⟩. ⟨hal-02369480⟩
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Iris Fischer, Jacques Dainat, Vincent Ranwez, Sylvain Glémin, Jean-François Dufayard, et al.. Impact of recurrent gene duplication on adaptation of plant genomes. BMC Plant Biology, BioMed Central, 2014, 14, pp.151. ⟨10.1186/1471-2229-14-151⟩. ⟨hal-01129945⟩
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Sylvain Glémin, Yves Clément, Jacques David, Adrienne Ressayre. GC content evolution in coding regions of angiosperm genomes: a unifying hypothesis. Trends in Genetics, Elsevier, 2014, 30 (7), pp.263-270. ⟨10.1016/j.tig.2014.05.002⟩. ⟨hal-02630525⟩
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Conference papers

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Christopher Sauvage, Benoit Nabholz, S. Gautier, M. Ruiz, Mathilde M. Causse, et al.. The study of domestication reveals a loss of diversity, signature of selection and transcriptional modifications in tomato (Solanum lycopersicum). XVIIIth Eucarpia Meeting, Vegetable section, Tomato Working group, Apr 2014, Avignon, France. 1 p. ⟨hal-02794508⟩
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2013

Journal articles

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Philippe Gayral, José Melo-Ferreira, Sylvain Glémin, Nicolas Bierne, Miguel Carneiro, et al.. Reference-Free Population Genomics from Next- Generation Transcriptome Data and the Vertebrate- Invertebrate Gap. PLoS Genetics, Public Library of Science, 2013, 9 (4), pp.e1003457. ⟨10.1371/journal.pgen.1003457⟩. ⟨hal-00866204⟩
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J. Kafer, M. Talianova, T. Bigot, E. Michu, L. Guéguen, et al.. Patterns of molecular evolution in dioecious and non-dioecious Silene. Journal of Evolutionary Biology, Wiley, 2013, 26, pp.335--46. ⟨10.1111/jeb.12052⟩. ⟨hal-02281842⟩
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Joelle Ronfort, Sylvain Glemin. Mating system, Haldane’s sieve, and the domestication process. Evolution - International Journal of Organic Evolution, Wiley, 2013, 67 (5), pp.1518-1526. ⟨10.1111/evo.12025⟩. ⟨hal-01267966⟩
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Emira Cherif, Karina Castillo, Nathalie Chabrillange, Sabira Abdoulkader Bourhan, Jean-Christophe Pintaud, et al.. Male-specific DNA markers provide genetic evidence of an XY chromosome system, a recombination arrest and allow the tracing of paternal lineages in date palm. New Phytologist, Wiley, 2013, 197 (2), pp.409-415. ⟨10.1111/nph.12069⟩. ⟨hal-01267987⟩
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Sylvain Glémin, Joelle Ronfort. Adaptation and maladaptation in selfing and outcrossing species: new mutations versus standing variation.. Evolution - International Journal of Organic Evolution, Wiley, 2013, 67 (1), pp.225-240. ⟨10.1111/j.1558-5646.2012.01778.x⟩. ⟨hal-01267999⟩
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Conference papers

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Vincent Ranwez, Yan Holtz, Gautier Sarah, Morgane Ardisson, Sylvain Santoni, et al.. Disentangling homeologous contigs in allo-tetraploid assembly: application to durum wheat. 11. Annual Research in Computational Molecular Biology (RECOMB), Oct 2013, Lyon, France. ⟨10.1186/1471-2105-14-S15-S15⟩. ⟨hal-01137179⟩
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2012

Journal articles

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Laurana Serres-Giardi, Khalid Belkhir, Jacques David, Sylvain Glémin. Patterns and evolution of nucleotide landscapes in seed plants. The Plant cell, American Society of Plant Biologists (ASPB), 2012, 24 (4), pp.1379-1397. ⟨10.1105/tpc.111.093674⟩. ⟨hal-02645525⟩
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2011

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Aline Muyle, L. Serres-Giardi, Adrienne Ressayre, J. Escobar, S. Glemin. GC-biased gene conversion and selection affect GC content in the Oryza genus (rice). Molecular Biology and Evolution, Oxford University Press (OUP), 2011, 28 (9), pp.2695-2706. ⟨10.1093/molbev/msr104⟩. ⟨hal-02297653⟩
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Juan-Sebastian Escobar, Celine Scornavacca, Alberto Cenci, Claire Guilhaumon, Sylvain Santoni, et al.. Multigenic phylogeny and analysis of tree incongruences in Triticeae (Poaceae). BMC Evolutionary Biology, BioMed Central, 2011, 11 (181), 17 p. ⟨10.1186/1471-2148-11-181⟩. ⟨hal-01499047⟩
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2010

Journal articles

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Juan Escobar, Alberto Cenci, Jeremy Bolognini, Annabelle A. Haudry, Stefan Laurent, et al.. AN INTEGRATIVE TEST OF THE DEAD-END HYPOTHESIS OF SELFING EVOLUTION IN TRITICEAE (POACEAE). Evolution - International Journal of Organic Evolution, Wiley, 2010, 64 (10), pp.no - no. ⟨10.1111/j.1558-5646.2010.01045.x⟩. ⟨hal-01907711⟩
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Florence Noël, Sandrine Maurice, Agnès Mignot, Sylvain Glémin, David Carbonell, et al.. Interaction of climate, demography and genetics: a ten-year study of Brassica insularis, a narrow endemic Mediterranean species. Conservation Genetics, Springer Verlag, 2010, 11 (2), pp.509-526. ⟨10.1007/s10592-010-0056-1⟩. ⟨halsde-00467232⟩
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A. Ratnakumar, Sylvain Mousset, S. Glémin, J. Berglund, N. Galtier, et al.. Detecting positive selection within genomes: the problem of biased gene conversion. Philosophical Transactions of the Royal Society B: Biological Sciences, Royal Society, The, 2010, 365 (1552), pp.2571-2580. ⟨10.1098/rstb.2010.0007⟩. ⟨hal-00539495⟩
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L. Duret, T. Bataillon, N. Bierne, Vincent Daubin, J. Dutheil, et al.. Evolution Moléculaire. sous la direction de Frédéric Thomas; Thierry Lefèvre; Michel Raymond. Biologie évolutive, De Boeck, pp.114-173, 2010, 978-2-8041-0161-9. ⟨hal-00539271⟩
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Poster communications

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Jean-Louis Pham, N. Ahmadi, J. David, Florent Engelmann, A. Gesquière, et al.. Agropolis Resource Center for Crop Conservation, Adaptation and Diversity (ARCAD): A new open multi-function platform devoted to plant agrobiodiversity. GPGS2010, Apr 2010, Bologne, Italy. pp.1, 2010, International Symposium on Genomics of Plant Genetic Ressources. ⟨hal-02758367⟩
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2009

Journal articles

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Sylvain Glémin, Thomas Bataillon. A comparative view of the evolution of grasses under domestication. New Phytologist, Wiley, 2009, 183 (2), pp.273-290. ⟨10.1111/j.1469-8137.2009.02884.x⟩. ⟨hal-02666409⟩
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N. Galtier, L. Duret, S. Glémin, Vincent Ranwez. GC-biased gene conversion promotes the fixation of deleterious amino acid changes in primates. Trends in Genetics, Elsevier, 2009, 25(1), pp.1-5. ⟨hal-00428324⟩
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2008

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Sylvain Glémin, Christophe Petit, Sandrine Maurice, Agnès Mignot. Consequences of low mate availability in the rare self-incompatible species Brassica insularis.. Conservation Biology, Wiley, 2008, 22 (1), pp.216-21. ⟨10.1111/j.1523-1739.2007.00864.x⟩. ⟨hal-00285235⟩
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Benoit Nabholz, Sylvain Glémin, Nicolas Galtier. Strong Variations of Mitochondrial Mutation Rate across Mammals--the Longevity Hypothesis. Molecular Biology and Evolution, Oxford University Press (OUP), 2008, 25 (1), pp.120-130. ⟨10.1093/molbev/msm248⟩. ⟨hal-03327979⟩
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A. A. Haudry, A. A. Cenci, C C Guilhaumon, Etienne Paux, S. S. Poirier, et al.. Mating system and recombination affect molecular evolution in four Triticeae species. Genetics Research, Cambridge University Press (CUP), 2008, 90 (1), pp.97-109. ⟨10.1017/S0016672307009032⟩. ⟨hal-00964193⟩
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A. Haudry, A. Cenci, C. Guilhaumon, E. Paux, S. Poirier, et al.. Mating system and recombination affect molecular evolution in four Triticeae species. Genetics Research, Cambridge University Press (CUP), 2008, 90, pp.97-109. ⟨hal-00697941⟩
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2007

Journal articles

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Sylvain Glémin. Mating systems and the efficacy of selection at the molecular level. Genetics, Genetics Society of America, 2007, 177 (2), pp.905-916. ⟨10.1534/genetics.107.073601⟩. ⟨halsde-00424426⟩
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A. Haudry, A. Cenci, C. Ravel, T. Bataillon, D. Brunel, et al.. Grinding up wheat: a massive loss of nucleotide diversity since domestication. Molecular Biology and Evolution, Oxford University Press (OUP), 2007, 24, pp.1506-1517. ⟨hal-00697942⟩
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Annabelle Haudry, Alberto Cenci, C. Ravel, Thomas Bataillon, Dominique Brunel, et al.. Grinding up wheat: A massive loss of nucleotide diversity since domestication. Molecular Biology and Evolution, Oxford University Press (OUP), 2007, 24 (7), pp.1506-1517. ⟨10.1093/molbev/msm077⟩. ⟨hal-01189435⟩
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2006

Journal articles

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Sylvain Glémin, Eric Bazin, Deborah Charlesworth. Impact of mating systems on patterns of sequence polymorphism in flowering plants. Proceedings of the Royal Society B: Biological Sciences, Royal Society, The, 2006, 273 (1604), pp.3011-3019. ⟨10.1098/rspb.2006.3657⟩. ⟨halsde-00340961⟩
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E. Bazin, Sylvain Glémin, Nicolas Galtier. Mitochondrial DNA and population size - Response. Science, American Association for the Advancement of Science (AAAS), 2006, 314 (5804), pp.1390. ⟨halsde-00339533⟩
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Sylvain Glémin, L. Vimond, J. Ronfort, T. Bataillon, Agnès Mignot. Marker-based investigation of inbreeding depression in the endangered species Brassica insularis. Heredity, Nature Publishing Group, 2006, 97 (4), pp.304-311. ⟨10.1038/sj.hdy.6800870⟩. ⟨halsde-00324579⟩
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E. Bazin, Sylvain Glémin, Nicolas Galtier. Population size does not influence mitochondrial genetic diversity in animals. Science, American Association for the Advancement of Science (AAAS), 2006, 312 (5773), pp.570-572. ⟨10.1126/science.1122033⟩. ⟨halsde-00339540⟩
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Julien Dutheil, Sylvain Gaillard, Eric Bazin, Sylvain Glémin, Vincent Ranwez, et al.. Bio++: a set of C++ libraries for sequence analysis, phylogenetics, molecular evolution and population genetics. BMC Bioinformatics, BioMed Central, 2006, 7, pp.188. ⟨10.1186/1471-2105-7-188⟩. ⟨halsde-00323971⟩
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2005

Journal articles

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Sylvain Glémin, Thierry Gaude, Marie-Laure Guillemin, Mathieu Lourmas, Isabelle Olivieri, et al.. Balancing selection in the wild: Testing population genetics theory of self-incompatibility in the rare species Brassica insularis. Genetics, Genetics Society of America, 2005, 171 (1), pp.279-289. ⟨10.1534/genetics.104.035915⟩. ⟨halsde-00325084⟩
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2004

Journal articles

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Renaud Vitalis, Sylvain Glémin, Isabelle Olivieri. When genes go to sleep: The population genetic consequences of seed dormancy and monocarpic perenniality. The American Naturalist, The American Society of Naturalists, 2004, 163 (2), pp.295-311. ⟨10.1086/381041⟩. ⟨halsde-00326231⟩
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Renaud Vitalis, S. Glemin, I. Olivieri. When genes go to sleep : the population genetics consequences of seed dormancy and monocarpic perenniality. The American Naturalist, The American Society of Naturalists, 2004, 163, pp.295-311. ⟨hal-00273249⟩
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2003

Journal articles

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Sylvain Glémin. How Are Deleterious Mutations Purged? Drift Versus Nonrandom Mating. Evolution - International Journal of Organic Evolution, Wiley, 2003, 57 (12), pp.2678-2687. ⟨10.1043/0014-3820(2003)057(2678:HADMPD)2.0.CO;2⟩. ⟨halsde-00333564⟩
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Sylvain Glémin, Joëlle Ronfort, Thomas Bataillon. Patterns of Inbreeding Depression and Architecture of the Load in Subdivided Populations. Genetics, Genetics Society of America, 2003, 165 (4), pp.2193-2212. ⟨10.1093/genetics/165.4.2193⟩. ⟨halsde-00333581⟩
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2001

Journal articles

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Sylvain Glémin, Thomas Bataillon, Joëlle Ronfort, Agnès Mignot, Isabelle Olivieri. Inbreeding Depression in Small Populations of Self-Incompatible Plants. Genetics, Genetics Society of America, 2001, 159 (3), pp.1217-1229. ⟨10.1093/genetics/159.3.1217⟩. ⟨halsde-00334970⟩
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S. Glemin, T. Bataillon, Joelle J. Ronfort, A. Mignot, Isabelle Olivieri. Inbreeding depression in small populations of self-incompatible plants. Genetics, Genetics Society of America, 2001, 159, pp.1217-1229. ⟨hal-02674719⟩
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2000

Book sections

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Joelle J. Ronfort, S. Glemin, T. Bataillon. Modelling the impact of drift and population subdivision on inbreeding depression and heterosis. Quantitative genetics and breeding methods: the way ahead, INRA Editions, 2000, Colloques de l'INRA. ⟨hal-02836175⟩
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